Gene Psyr_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2410 
Symbol 
ID3367925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2791166 
End bp2792305 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content61% 
IMG OID637652756 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_235487 
Protein GI66045646 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TCGTCTATAG CGGTCCGCGT GACGTCAGTG TCAAAAACGT ACCGGATGCG 
AAGATTCAGA AGCCGACAGA TGCGCTTGTC CGAGTGACCT CCACGAATAT CTGTGGCTCG
GACCTGCACA TGTACGAAGG CCGCACGTCG TTCGAGACCG GGCGCATTTT CGGCCATGAG
AACCTCGGCC AGGTGATTGA AGTGGGCGCC GGCGTTGACC GCATCAAGGT GGGCGACTGG
GTGTGCCTGC CGTTCAACAT TGGCTGCGGC TTTTGCGAAA ACTGTGAGAA GGGCCTGACC
GGTTATTGCC TGACCGCCAA CCCTGGCAGC GCTGGCGCGG CCTATGGTTT TGCCGATATG
GGCGATCACG AAGGTGGCCA GGCCGAGTTG CTGCGCGTGC CGTATGCCGA CTTCAACTGC
CTGCTGTTGC CCGAAGATGC CGCCGAGCGT GAAGAAGATT ACGTCATGCT CTCGGACATC
TTTCCTACCG GCTGGCATGC CACCGAGCTG GCCGGGCTGC TGCCTGGCGA AAGCGTTGCC
ATCTACGGTG CCGGCCCGGT CGGTCTGATG GCTGCCCACT CGGCAATGAT CAAGGGCGCC
TCGCAGGTGT TCGTGGTCGA CAACCATCCT GATCGTCTGG CCCTCGCGGC GAAGATGGGC
GCGACGCCGA TCAACTCGCT GGAGCAGGGC GCGGTGGATC AGATCCTCAA TCTGACCGAT
GGCAAAGGCA CCGACCGAGG CTGTGAGTGC GTCGGTTATC AGTGCTGCGA CCGTCATGGT
CACGAGGCCA ATCACGTCAC CATGAACAAC CTCGTTGCCT CGACCAAGGC GACTGGCGGA
ATCGGTGTCG TGGGCGTTTT CGTGCCGCAG GATCCGGGCG CCAAAAGCGA CCTCGCCAAG
GAAGGCAAGA TGGCCTTCGA CTTCGGCTCG TTCTGGTTCA AGGGCCAGCA GATCCGTACC
GGTCAGGCCA ACGTCAAGGC TTACAACCGT CGCCTCGCCG AGCTGATCCA CCACGGTCGC
GCCAAGCCGT CGCAGATCAT TTCCCATCGC CTGAAGCTTG AAGAGGGCCC TGACGCCTAC
AAGCACTTCG ATGCGCGTGA TGAAGGCTGG ACCAAGGTAG TGCTCAAGCC AGGTGCGTGA
 
Protein sequence
MKAIVYSGPR DVSVKNVPDA KIQKPTDALV RVTSTNICGS DLHMYEGRTS FETGRIFGHE 
NLGQVIEVGA GVDRIKVGDW VCLPFNIGCG FCENCEKGLT GYCLTANPGS AGAAYGFADM
GDHEGGQAEL LRVPYADFNC LLLPEDAAER EEDYVMLSDI FPTGWHATEL AGLLPGESVA
IYGAGPVGLM AAHSAMIKGA SQVFVVDNHP DRLALAAKMG ATPINSLEQG AVDQILNLTD
GKGTDRGCEC VGYQCCDRHG HEANHVTMNN LVASTKATGG IGVVGVFVPQ DPGAKSDLAK
EGKMAFDFGS FWFKGQQIRT GQANVKAYNR RLAELIHHGR AKPSQIISHR LKLEEGPDAY
KHFDARDEGW TKVVLKPGA