Gene Psyr_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2405 
Symbol 
ID3367920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2786517 
End bp2787269 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID637652751 
Producttranscriptional regulator GntR 
Protein accessionYP_235482 
Protein GI66045641 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.146644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.768585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TGCCTCTCGA CGACACCTTC AAGGTCAACC GCAACCCCGT CACGCTGCGC 
GAGATCGTGC TGGACAAGCT GCGCAGCGCA ATCATGAACT TTCAGCTGCT GCCGGGTGAC
CGTCTGGTCG AGCGTGATCT GTGTGACCGC CTCGGCGTGA GCCGCACCTC GGTGCGCGAA
GCACTGCGCC ACCTGGAATC CGAAGGTCTG GTCGAGTTCG CCGATGCCAA GGGCCCGCGC
GTTGCCATCA TCACGCTGGC TGACGCGTGC GATATCTACG AACTACGCTG CGTGCTCGAA
GGCCTGATCG TTCAGCTGTT TACCCTGCGG GCCAAACCCA AGGACATTCG CGCACTGGAA
AAAGCCCTGG AGGAAAATCG TCAGGCGCTC AAGGAAGGCG AACTGCAGCA GGTGATCGAC
TCGGTCCAGG GTTTCTACGA TGTACTGCTG GAAGGCTCGG GCAACCATGT GGCCGCGACC
CAGCTACGCC AGTTGCAGGC GCGCATCAGC TACCTGCGCG CCACCTCGGT ATCCCAGGAA
AACCGCCGCG GTGCCAGCAA CAAGGAAATG GAGCTCATGG TCGAAGCGAT CAAGAGCGGC
GACCCGCTGG CCGCGCATCA GGCGTCGGTC GATCACGTAC GCAACGCCGC ACGCGTGGCG
CTGGAATACC TCAAATCCAA GCAGGATGAA GTCAGCAAAG TCCGCGACAT CGTCGCCCCC
GTCGCGCTGA AAGAACCTCG CATAGGTCGC TGA
 
Protein sequence
MKRLPLDDTF KVNRNPVTLR EIVLDKLRSA IMNFQLLPGD RLVERDLCDR LGVSRTSVRE 
ALRHLESEGL VEFADAKGPR VAIITLADAC DIYELRCVLE GLIVQLFTLR AKPKDIRALE
KALEENRQAL KEGELQQVID SVQGFYDVLL EGSGNHVAAT QLRQLQARIS YLRATSVSQE
NRRGASNKEM ELMVEAIKSG DPLAAHQASV DHVRNAARVA LEYLKSKQDE VSKVRDIVAP
VALKEPRIGR