Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2405 |
Symbol | |
ID | 3367920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2786517 |
End bp | 2787269 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652751 |
Product | transcriptional regulator GntR |
Protein accession | YP_235482 |
Protein GI | 66045641 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.146644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.768585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC TGCCTCTCGA CGACACCTTC AAGGTCAACC GCAACCCCGT CACGCTGCGC GAGATCGTGC TGGACAAGCT GCGCAGCGCA ATCATGAACT TTCAGCTGCT GCCGGGTGAC CGTCTGGTCG AGCGTGATCT GTGTGACCGC CTCGGCGTGA GCCGCACCTC GGTGCGCGAA GCACTGCGCC ACCTGGAATC CGAAGGTCTG GTCGAGTTCG CCGATGCCAA GGGCCCGCGC GTTGCCATCA TCACGCTGGC TGACGCGTGC GATATCTACG AACTACGCTG CGTGCTCGAA GGCCTGATCG TTCAGCTGTT TACCCTGCGG GCCAAACCCA AGGACATTCG CGCACTGGAA AAAGCCCTGG AGGAAAATCG TCAGGCGCTC AAGGAAGGCG AACTGCAGCA GGTGATCGAC TCGGTCCAGG GTTTCTACGA TGTACTGCTG GAAGGCTCGG GCAACCATGT GGCCGCGACC CAGCTACGCC AGTTGCAGGC GCGCATCAGC TACCTGCGCG CCACCTCGGT ATCCCAGGAA AACCGCCGCG GTGCCAGCAA CAAGGAAATG GAGCTCATGG TCGAAGCGAT CAAGAGCGGC GACCCGCTGG CCGCGCATCA GGCGTCGGTC GATCACGTAC GCAACGCCGC ACGCGTGGCG CTGGAATACC TCAAATCCAA GCAGGATGAA GTCAGCAAAG TCCGCGACAT CGTCGCCCCC GTCGCGCTGA AAGAACCTCG CATAGGTCGC TGA
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Protein sequence | MKRLPLDDTF KVNRNPVTLR EIVLDKLRSA IMNFQLLPGD RLVERDLCDR LGVSRTSVRE ALRHLESEGL VEFADAKGPR VAIITLADAC DIYELRCVLE GLIVQLFTLR AKPKDIRALE KALEENRQAL KEGELQQVID SVQGFYDVLL EGSGNHVAAT QLRQLQARIS YLRATSVSQE NRRGASNKEM ELMVEAIKSG DPLAAHQASV DHVRNAARVA LEYLKSKQDE VSKVRDIVAP VALKEPRIGR
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