Gene Psyr_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2404 
Symbol 
ID3367919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2785952 
End bp2786515 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content60% 
IMG OID637652750 
ProductNUDIX hydrolase 
Protein accessionYP_235481 
Protein GI66045640 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.387956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.764687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAC CGCGCTTCTG TCCCCAATGC GGTAGCGCTG ATCTGGTTCA GCGTGTGCCG 
TCGGGCGATA CGCATGTGCG GTTGGTCTGT GGCGGCTGTC AGTACATTCA CTACGTCAAT
CCGAAGATCA TCGCGGGTTG CATCATCGAG CAGGAAGGCA AGTACCTGCT CTGCCAGCGT
GCCATCCCGC CGCGCCCCGG CACCTGGACA CTGCCTGCCG GTTTCATGGA AAGCGGTGAA
ACCACCGAGC AGGCGGCGCT GCGTGAAGTC TGGGAAGAAA CCGGTGTACG CGCCGAGATC
CTTTCGCCCT ACTCCATTTT CAGCGTGCCG CGCATCAGCG AAGTCTACAT CGTGTTCCGT
GCCATCGCGC TGGAGGTGAC CGGCCAGTTC GGCCCGGAAA CCCTGGACTA CAGATTCTTC
GCCGCCGAAG ACATCCCGTG GGACAGCATC TATTACCCCG CTATCCGGCA GATACTGGAA
CGCTATATCG AAGAGCGTCA GGCCGGTGTC TACGGTATTT ATATCGGCAA CGACGACACC
GGCAAGGTGC ACTTTATCCG GTGA
 
Protein sequence
MATPRFCPQC GSADLVQRVP SGDTHVRLVC GGCQYIHYVN PKIIAGCIIE QEGKYLLCQR 
AIPPRPGTWT LPAGFMESGE TTEQAALREV WEETGVRAEI LSPYSIFSVP RISEVYIVFR
AIALEVTGQF GPETLDYRFF AAEDIPWDSI YYPAIRQILE RYIEERQAGV YGIYIGNDDT
GKVHFIR