Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2404 |
Symbol | |
ID | 3367919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2785952 |
End bp | 2786515 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652750 |
Product | NUDIX hydrolase |
Protein accession | YP_235481 |
Protein GI | 66045640 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.387956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.764687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAC CGCGCTTCTG TCCCCAATGC GGTAGCGCTG ATCTGGTTCA GCGTGTGCCG TCGGGCGATA CGCATGTGCG GTTGGTCTGT GGCGGCTGTC AGTACATTCA CTACGTCAAT CCGAAGATCA TCGCGGGTTG CATCATCGAG CAGGAAGGCA AGTACCTGCT CTGCCAGCGT GCCATCCCGC CGCGCCCCGG CACCTGGACA CTGCCTGCCG GTTTCATGGA AAGCGGTGAA ACCACCGAGC AGGCGGCGCT GCGTGAAGTC TGGGAAGAAA CCGGTGTACG CGCCGAGATC CTTTCGCCCT ACTCCATTTT CAGCGTGCCG CGCATCAGCG AAGTCTACAT CGTGTTCCGT GCCATCGCGC TGGAGGTGAC CGGCCAGTTC GGCCCGGAAA CCCTGGACTA CAGATTCTTC GCCGCCGAAG ACATCCCGTG GGACAGCATC TATTACCCCG CTATCCGGCA GATACTGGAA CGCTATATCG AAGAGCGTCA GGCCGGTGTC TACGGTATTT ATATCGGCAA CGACGACACC GGCAAGGTGC ACTTTATCCG GTGA
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Protein sequence | MATPRFCPQC GSADLVQRVP SGDTHVRLVC GGCQYIHYVN PKIIAGCIIE QEGKYLLCQR AIPPRPGTWT LPAGFMESGE TTEQAALREV WEETGVRAEI LSPYSIFSVP RISEVYIVFR AIALEVTGQF GPETLDYRFF AAEDIPWDSI YYPAIRQILE RYIEERQAGV YGIYIGNDDT GKVHFIR
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