| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2400 |
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| Symbol | |
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| ID | 3367915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2782168 |
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| End bp | 2783124 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652746 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_235477 |
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| Protein GI | 66045636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0272456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.898727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTC AAGTAAAGAT GACAGCGGTT GCTCCTCGTC AATCCATGCC GGCCGGGGGT
GCTTCCAGCA CCGCTGGTGC GGCCAGCCAG AAGGCGCCGG GCATGCCGCC ATCCCCTTCC
CTCGCACAGC GCTGGCGTGG CAGCCGCAAT CTGCTTCCGG CGCTGATCTT CCTCGGACTG
TTCTTCTTCG CGCCGCTGAT TGCTCTACTG CTGCGCGGCG TGCTTGAGCC GGTGCCGGGC
CTTGGCAACT ATGAGCAACT GTTTGCCAAC TCGGCCTACT CGCGGGTGCT GCTCAATACC
TTTTCCGTAG CCGGTCTGGT GACGCTGTTC AGCCTGCTGC TGGGCTTTCC GCTCGCCTGG
GTGATCACCC TGGTGCCGCG CGGCTGGGGC CGCTGGATTC TCAATATCGT GCTGCTGTCG
ATGTGGACCA GCCTGCTGGC CCGCACCTAT TCGTGGCTGG TGCTGTTGCA GGCCTCCGGG
GTCGTCAACA AGGCCTTGAT GGCCATGGGT ATCACCGATC AACCGCTGGA AATGGTGCAC
AACCTGACCG GTGTGGTGAT CGGCATGAGC TACATCATGA TTCCGTTCAT CGTCCTGCCA
TTGCAGGCGA CCATGCAGGC CATCGATCCC ATGGTGCTGC AGGCGGGCTC GATCTGCGGT
GCCAGCCCTT GGAGCAATTT CTTCAGAGTG TTTCTGCCAC TGTGCCGTCC TGGGCTGTTT
TCCGGAGGCC TGATGGTGTT TGTCATGTCA CTCGGTTACT ACGTCACCCC GGCACTGCTC
GGCGGCGCGC AGAACATGAT GCTGCCCGAA TTCATCGTCC AGCAGGTGCA GTCGTTCCTC
AACTGGGGGC TGGCCAGTGC CGCCGCTGCG TTGTTGGTGC TGATCACGCT GGTGCTGTTC
TACTTCTACC TGAAGCTCCA GCCGGAATCA CCGGTCGGCG CCAGCAACGC GAGGTAA
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| Protein sequence | MAGQVKMTAV APRQSMPAGG ASSTAGAASQ KAPGMPPSPS LAQRWRGSRN LLPALIFLGL
FFFAPLIALL LRGVLEPVPG LGNYEQLFAN SAYSRVLLNT FSVAGLVTLF SLLLGFPLAW
VITLVPRGWG RWILNIVLLS MWTSLLARTY SWLVLLQASG VVNKALMAMG ITDQPLEMVH
NLTGVVIGMS YIMIPFIVLP LQATMQAIDP MVLQAGSICG ASPWSNFFRV FLPLCRPGLF
SGGLMVFVMS LGYYVTPALL GGAQNMMLPE FIVQQVQSFL NWGLASAAAA LLVLITLVLF
YFYLKLQPES PVGASNAR
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