Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2398 |
Symbol | |
ID | 3367913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2780195 |
End bp | 2781349 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652744 |
Product | ABC transporter |
Protein accession | YP_235475 |
Protein GI | 66045634 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0142955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.636582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG TGATCAAAGA CCCCGCCCAT CAGCCACACA ACACACTGGT CAGCCTGTGT AATCTGAACA AGCACTATGG AAATTTCGCC GCCGTCGACG ACATTTCCCT GGACATCCAG GACGGCGAAT TCCTGACCTT CCTGGGCTCC AGCGGCTCGG GAAAAAGCAC CACGCTGTCG ATGCTCGCCG GCTTCGAAAC GCCCAGCTCG GGCGAGATTC TGGTGGGTGG CAAATCGCTG GTGAATGTGC CGCCACACAA GCGCGACATC GGCATGGTGT TTCAGCGCTA CTCGCTGTTC CCGCACCTGT CGGTACGCGA CAACATTGCC TTCCCGCTGG CGATCCGCAA GCTGCCTGCG GCCGAGCGCG AGAAGAAAGT CGATGCGATG CTCAAGCTGG TTCAGCTGGA AGCCTTTGCT CATCGGCGCC CGTCGCAACT GTCAGGCGGC CAGCAGCAGC GGGTCGCCAT CGCCCGAGCG CTGGTTTACG AGCCGCGCAT CCTGCTGATG GACGAGCCTC TGGGCGCACT GGACAAGAAG CTGCGCGAAG ACCTGCAGGA CGAACTGCGC CAGTTGCATC GCCGGCTGGG CATCACCATC GTTTACGTAA CCCATGATCA GGAAGAAGCC ATGCGCCTGT CACAGCGCAT CGCCATTTTC AGCCATGGCA AGATCGTCGG TCTGGGCTCG GGCTATGACC TGTATCAGGA TCCGCCGAAT GCCTTCGTCG CCTCGTTTCT CGGCAACTCG AACTTCCTCA GGCTCAAGGC CCAGGGCAAT GCCGTGGCAA CCTTCGAAGG CAGCACACTG GCGATTCGCC TGACCGCAGG GCTGAAGACC GATCAGGAGG TGCTGCTCAT GGTGCGCCCG GAGAAAGCCC AGGCGCTGAG CGTGTCCCAG GCAGCGGCCA TGCCGCTTGA AGCAGGCTGG AACGAGGTAA ACGCCACGGT TGCTGAAGTG CTTTTTCTCG GCGAGAGCCA GACATGCTCG GTGGTCTCAG CCGGAGGCAC TGCCATGACG GTCAAAGCGC TTTCTGCGAA CGGCATGGCG CTCAAGGCGG GCGACCCGGT GCGCGTGCGT TGGGCCGCGG CAGACGCGTG CATCTACACC GAGTGGACCG ACAGCGACCT GAACAAGGCC GCCGGCACGC ACTGA
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Protein sequence | MSAVIKDPAH QPHNTLVSLC NLNKHYGNFA AVDDISLDIQ DGEFLTFLGS SGSGKSTTLS MLAGFETPSS GEILVGGKSL VNVPPHKRDI GMVFQRYSLF PHLSVRDNIA FPLAIRKLPA AEREKKVDAM LKLVQLEAFA HRRPSQLSGG QQQRVAIARA LVYEPRILLM DEPLGALDKK LREDLQDELR QLHRRLGITI VYVTHDQEEA MRLSQRIAIF SHGKIVGLGS GYDLYQDPPN AFVASFLGNS NFLRLKAQGN AVATFEGSTL AIRLTAGLKT DQEVLLMVRP EKAQALSVSQ AAAMPLEAGW NEVNATVAEV LFLGESQTCS VVSAGGTAMT VKALSANGMA LKAGDPVRVR WAAADACIYT EWTDSDLNKA AGTH
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