| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2396 |
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| Symbol | |
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| ID | 3367911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2778054 |
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| End bp | 2779175 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652742 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_235473 |
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| Protein GI | 66045632 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0821619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.606865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAT TCAGAGAGAG CGCCGCCATG AACAACAACA AACTGCGTAT TGCTGCCATC
GCCGGTGACG GCATCGGCCT GGAGGTGCTG CCCGAAGGAG TGCGCGTGGT GCAGGCCGCT
GCCGCACGGC ACGGGCTGGA ACTGGAGTTC GAATACTTCG AATGGGCCAG CTGCGATTAC
TACCTGAAAC ACGGCAAGAT GATGCCGGAC GACTGGTTCG AACAGCTCAA AGGCTTTGAC
TCGATCTTCT TCGGCGCCGT CGGCTGGCCG GAAAAGGTCC CGGATCACAT CTCGCTGTGG
GGCTCGCTGC TCAAGTTTCG TCGCGAATTC GATCAGTACG CAAATATCCG CCCGGTGCGG
CTGTTTCCCG GCGTGCCCTG CCCGCTGGCC AATCGCAAAC CGGGCGACAT CGACTTTGTC
GTGGTCCGGG AAAACACCGA AGGTGAATAC TCGTCGCTGG GCGGGATCAT GTTCGAGAAC
ACCGAAAACG AATTCGTGCT GCAGGAATCG GTGTTCACCC GTCGTGGTGT CGACCGCATT
CTCAAGTTCG CCTTCGAGAT GGCCAGCAAA CGCGAGCGCA AGCACGTCAC CTCGGCGACC
AAATCCAATG GCATGGCCAT CAGCATGCCG TACTGGGACA AGCGCACCGA AGCGATGGCC
AGCCAGTACC CCGGCATCAG CTGGGACAAG CAACACATCG ACATTCTCTG CGCGCGTTTC
GTGCTGCAAC CCGAGCGCTT CGACGTGGTG GTGGCGTCCA ACCTGTTCGG CGACATCCTC
AGCGACCTCG GCCCGGCGTG CGCAGGCACC ATCGGCATTG CGCCGTCAGC CAACCTCAAC
CCCGAGCGCC ACTTCCCGTC GCTGTTCGAA CCGGTCCACG GCTCGGCCCC GGACATCTTC
GGCCAGAACA TCGCCAACCC GATCGCAATG ATTTGGTCCG GCGCACTGAT GCTGGAGTTC
CTCGGCCAGG GCGATCAGCG TTTCACGGCG GCCCATGACG AGATCATCAC CGCCATCGAG
CAAGTGATCG CCAACGGCGA CGTCACGCCG GATCTGGGCG GCACGCTTTC GACTCAGCAC
GTGGGTGCGG CGATTGCCGA GCGGGTTTCT GCAGGCCATT AA
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| Protein sequence | MDRFRESAAM NNNKLRIAAI AGDGIGLEVL PEGVRVVQAA AARHGLELEF EYFEWASCDY
YLKHGKMMPD DWFEQLKGFD SIFFGAVGWP EKVPDHISLW GSLLKFRREF DQYANIRPVR
LFPGVPCPLA NRKPGDIDFV VVRENTEGEY SSLGGIMFEN TENEFVLQES VFTRRGVDRI
LKFAFEMASK RERKHVTSAT KSNGMAISMP YWDKRTEAMA SQYPGISWDK QHIDILCARF
VLQPERFDVV VASNLFGDIL SDLGPACAGT IGIAPSANLN PERHFPSLFE PVHGSAPDIF
GQNIANPIAM IWSGALMLEF LGQGDQRFTA AHDEIITAIE QVIANGDVTP DLGGTLSTQH
VGAAIAERVS AGH
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