Gene Psyr_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2372 
SymbolaraG 
ID3367887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2750360 
End bp2751883 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content62% 
IMG OID637652718 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_235449 
Protein GI66045608 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.179136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.245048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGG CTATCGAGCA ATACGCCACA GGCGGTGCCT TGCGCTTCAA CGGCATCGGC 
AAGGTCTTCC CCGGCGTCAA GGCGCTTTCG GACATCAGTT TCGAAGCGCG CCCCGGCAGT
GTTCACGCAT TGATGGGAGA GAACGGTGCC GGCAAATCCA CGCTGCTGAA AATCCTTGGC
GGGTCGTATC AGCCCAACAG CGGCACCTTG CAGATCGGCG AGCAGAGCTA TCAGTTCAAG
TCCACCGCCG AGAGCATCGC GGCGGGTGTG GCGGTGATTC ACCAGGAGCT GCATCTGGTG
CCGGAAATGA CCGTTGCCGA GAACCTGCTG CTCGGGCACA TGCCCAATCG CTTCGGGCTG
ATCAATCGCG GTGCGATGTA TCGCCGGGCC GGCGAGCTGC TCAAGGGTCT GGCTGACGAA
ATTGACCCGC ACACACGCTT GGGCGACCTT TCGCTGGGGC AGCGGCAATT GGTCGAGATC
GCCAAGGCCA TGTCGCGCAA TGCTCATGTC ATCGCCTTTG ACGAGCCCAC CAGCAGCCTG
TCGGCGCGTG AGATCGACCG ACTGATGGCG ATCATCGTGC GCCTGCGCGA CGAGGGCCGA
GTGATTCTTT ACGTGTCGCA TCGCATGGAA GAAATCTTCC GCGTCTGTGA TGCGGTGACG
GTGTTCAAGG ACGGACGCTT CGTCAAGACG TTCGAGCAAA TGGCCGATCT CGACCATGAC
CGACTGGTGA CCTGCATGGT CGGTCGCGAT ATCCAGAACA TCTACAACTA CCGCCCTCGC
CAGCATCAGG GGCCGAGCCT GCGGGTTACC GGCCTGCTGG GGCCGGGCCT GCACGAGCCG
GTCACCTTCG CCGTGCAGAA GGGCGAAGTG CTGGGCTTCT TCGGCCTGGT CGGCGCCGGG
CGTACCGAGC TGTTCCGGCT GCTCTCGGGG CTTACCCGCA GCTCTGCAGG CACCCTGCAA
CTGGACGGCA AACCGCTGAC ACTCAAGTCT CCCCGAGATG CCATCGAGGC TGGAATTCTG
CTCTGCCCGG AGGACCGCAA GAAAGAAGGC ATCGTGCCGC TGTCCAGCGT CGCAGAGAAC
ATCAACATCG GTGCGCGCCC CCGGCACGTG AACCTCGGTT GCCTGATTCA GGGTCGCTGG
GAGCGTGACA ACGCACGCAG CCAGATCAAG TCGATGAACG TCAAGACGCC ATCGCCCGAG
CAGCAGATCA TGTTCCTCTC CGGCGGCAAT CAACAGAAGG CGATTCTTGG CCGCTGGCTG
TCGATGCCCA TGAAAGTCCT GCTGCTGGAC GAGCCGACTC GCGGGATCGA CGTCGGGGCC
AAGTCCGAGA TTTACGAGAT CATTCACAAC CTGGCCGCGG ACGGTATCGC GGTGATTGTG
GTCTCCAGCG ATCTGATGGA AGTGATGGGC ATTTCAGACC GCATTCTGGT GATGAGCGAA
GGCGCAATCA CCGGTGAACT CAATCGCGAC GAGGCTGACG AGTCGCGACT CCTGCAATTG
GCTCTGCCTC GCACGCGCGG CTGA
 
Protein sequence
MQQAIEQYAT GGALRFNGIG KVFPGVKALS DISFEARPGS VHALMGENGA GKSTLLKILG 
GSYQPNSGTL QIGEQSYQFK STAESIAAGV AVIHQELHLV PEMTVAENLL LGHMPNRFGL
INRGAMYRRA GELLKGLADE IDPHTRLGDL SLGQRQLVEI AKAMSRNAHV IAFDEPTSSL
SAREIDRLMA IIVRLRDEGR VILYVSHRME EIFRVCDAVT VFKDGRFVKT FEQMADLDHD
RLVTCMVGRD IQNIYNYRPR QHQGPSLRVT GLLGPGLHEP VTFAVQKGEV LGFFGLVGAG
RTELFRLLSG LTRSSAGTLQ LDGKPLTLKS PRDAIEAGIL LCPEDRKKEG IVPLSSVAEN
INIGARPRHV NLGCLIQGRW ERDNARSQIK SMNVKTPSPE QQIMFLSGGN QQKAILGRWL
SMPMKVLLLD EPTRGIDVGA KSEIYEIIHN LAADGIAVIV VSSDLMEVMG ISDRILVMSE
GAITGELNRD EADESRLLQL ALPRTRG