Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2372 |
Symbol | araG |
ID | 3367887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2750360 |
End bp | 2751883 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652718 |
Product | L-arabinose transporter ATP-binding protein |
Protein accession | YP_235449 |
Protein GI | 66045608 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.179136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.245048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGG CTATCGAGCA ATACGCCACA GGCGGTGCCT TGCGCTTCAA CGGCATCGGC AAGGTCTTCC CCGGCGTCAA GGCGCTTTCG GACATCAGTT TCGAAGCGCG CCCCGGCAGT GTTCACGCAT TGATGGGAGA GAACGGTGCC GGCAAATCCA CGCTGCTGAA AATCCTTGGC GGGTCGTATC AGCCCAACAG CGGCACCTTG CAGATCGGCG AGCAGAGCTA TCAGTTCAAG TCCACCGCCG AGAGCATCGC GGCGGGTGTG GCGGTGATTC ACCAGGAGCT GCATCTGGTG CCGGAAATGA CCGTTGCCGA GAACCTGCTG CTCGGGCACA TGCCCAATCG CTTCGGGCTG ATCAATCGCG GTGCGATGTA TCGCCGGGCC GGCGAGCTGC TCAAGGGTCT GGCTGACGAA ATTGACCCGC ACACACGCTT GGGCGACCTT TCGCTGGGGC AGCGGCAATT GGTCGAGATC GCCAAGGCCA TGTCGCGCAA TGCTCATGTC ATCGCCTTTG ACGAGCCCAC CAGCAGCCTG TCGGCGCGTG AGATCGACCG ACTGATGGCG ATCATCGTGC GCCTGCGCGA CGAGGGCCGA GTGATTCTTT ACGTGTCGCA TCGCATGGAA GAAATCTTCC GCGTCTGTGA TGCGGTGACG GTGTTCAAGG ACGGACGCTT CGTCAAGACG TTCGAGCAAA TGGCCGATCT CGACCATGAC CGACTGGTGA CCTGCATGGT CGGTCGCGAT ATCCAGAACA TCTACAACTA CCGCCCTCGC CAGCATCAGG GGCCGAGCCT GCGGGTTACC GGCCTGCTGG GGCCGGGCCT GCACGAGCCG GTCACCTTCG CCGTGCAGAA GGGCGAAGTG CTGGGCTTCT TCGGCCTGGT CGGCGCCGGG CGTACCGAGC TGTTCCGGCT GCTCTCGGGG CTTACCCGCA GCTCTGCAGG CACCCTGCAA CTGGACGGCA AACCGCTGAC ACTCAAGTCT CCCCGAGATG CCATCGAGGC TGGAATTCTG CTCTGCCCGG AGGACCGCAA GAAAGAAGGC ATCGTGCCGC TGTCCAGCGT CGCAGAGAAC ATCAACATCG GTGCGCGCCC CCGGCACGTG AACCTCGGTT GCCTGATTCA GGGTCGCTGG GAGCGTGACA ACGCACGCAG CCAGATCAAG TCGATGAACG TCAAGACGCC ATCGCCCGAG CAGCAGATCA TGTTCCTCTC CGGCGGCAAT CAACAGAAGG CGATTCTTGG CCGCTGGCTG TCGATGCCCA TGAAAGTCCT GCTGCTGGAC GAGCCGACTC GCGGGATCGA CGTCGGGGCC AAGTCCGAGA TTTACGAGAT CATTCACAAC CTGGCCGCGG ACGGTATCGC GGTGATTGTG GTCTCCAGCG ATCTGATGGA AGTGATGGGC ATTTCAGACC GCATTCTGGT GATGAGCGAA GGCGCAATCA CCGGTGAACT CAATCGCGAC GAGGCTGACG AGTCGCGACT CCTGCAATTG GCTCTGCCTC GCACGCGCGG CTGA
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Protein sequence | MQQAIEQYAT GGALRFNGIG KVFPGVKALS DISFEARPGS VHALMGENGA GKSTLLKILG GSYQPNSGTL QIGEQSYQFK STAESIAAGV AVIHQELHLV PEMTVAENLL LGHMPNRFGL INRGAMYRRA GELLKGLADE IDPHTRLGDL SLGQRQLVEI AKAMSRNAHV IAFDEPTSSL SAREIDRLMA IIVRLRDEGR VILYVSHRME EIFRVCDAVT VFKDGRFVKT FEQMADLDHD RLVTCMVGRD IQNIYNYRPR QHQGPSLRVT GLLGPGLHEP VTFAVQKGEV LGFFGLVGAG RTELFRLLSG LTRSSAGTLQ LDGKPLTLKS PRDAIEAGIL LCPEDRKKEG IVPLSSVAEN INIGARPRHV NLGCLIQGRW ERDNARSQIK SMNVKTPSPE QQIMFLSGGN QQKAILGRWL SMPMKVLLLD EPTRGIDVGA KSEIYEIIHN LAADGIAVIV VSSDLMEVMG ISDRILVMSE GAITGELNRD EADESRLLQL ALPRTRG
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