| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2371 |
|---|
| Symbol | |
|---|
| ID | 3367886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2749292 |
|---|
| End bp | 2750305 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637652717 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_235448 |
|---|
| Protein GI | 66045607 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.129907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.555114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGTC GTCACGGGAT TCGTTCCCTG TGCTGTGCCG CTGTCACTAC CGCCATTCTG
GGCATGAGTG GCATCACCTC CGCTGCCGAA GAAGTCAAAA TCGGCTTTCT GGTCAAGCAG
GCCGAAGAGC CGTGGTTCCA GGCCGAATGG GCAGGTGCCG AAAAAGCCGG CAAGGAGCAT
GGCTTTACCG TCATCAAGAT TGCCGTGCCA GACGGTGAAA AGACCCTGAC CGCTATCGAT
AACCTCGCCG CCAACGGTGC CAAGGGTTTC GTGATCTGCC CGCCTGACGT GTCGCTCGGC
CCTGCGATCG TGGCCAAGGC CAAAGCGCTG GGGTTGAAAG TCATGGCTGT GGATGATCGC
TTTGTCGACG CCAAGGGCAA CTTCATGGAG GACGTGCCTT ACCTGGGCAT GGCTGCCTTT
GAAGTAGGCC AGAAGCAGGG CGTCGAAATG GCCAAGGAAG CGAAAAATCG CAAGTGGGAC
AAGGATGGCT GGAAAGGCAC CTACGCGATC ATCAACACTT ATAACGAGCT GGATACCGGC
AAGAAACGCA CGGATGGTTC GGTGAAGTCG CTTGAGGAAG CCGGCTTGCC GAAGGACCAT
ATCGTCTTCA CCGCACAGAA AACCCTCGAT GTGCCAGGTA GCATGGACGC CACCAACTCG
GCGCTGCCAA AACTGCCAGG CGATGCCAAG AGGCTGATCA TCGGCGGTAT GAACGACAAC
ACCGTATTGG GTGGGGTACG TGCGACTTCT ACCAATGGCT TTGAAGCGGA TGACGTGATC
GGGATCGGTA TCAACGGCAC CGATGCGATC GACGAACTCA AGAAGAAAGA AAGCGGCTTC
TTTGGCTCTA TGCTGCCGAA CCCTGGCAAA GAGGGTTATG ACACCGCGTT GCATGTTTAC
GAGTGGGCCA CCAAGGGCAC AGAACCACCC AAGTACACCG CCCTGGACGA CGTGACACTG
ATCAAGCGCA CCAACTTCCA GGAAATACTG ACCGAGCGTG GTCTGTGGAA GTGA
|
|---|
| Protein sequence | MLSRHGIRSL CCAAVTTAIL GMSGITSAAE EVKIGFLVKQ AEEPWFQAEW AGAEKAGKEH
GFTVIKIAVP DGEKTLTAID NLAANGAKGF VICPPDVSLG PAIVAKAKAL GLKVMAVDDR
FVDAKGNFME DVPYLGMAAF EVGQKQGVEM AKEAKNRKWD KDGWKGTYAI INTYNELDTG
KKRTDGSVKS LEEAGLPKDH IVFTAQKTLD VPGSMDATNS ALPKLPGDAK RLIIGGMNDN
TVLGGVRATS TNGFEADDVI GIGINGTDAI DELKKKESGF FGSMLPNPGK EGYDTALHVY
EWATKGTEPP KYTALDDVTL IKRTNFQEIL TERGLWK
|
|---|
| |