Gene Psyr_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2370 
Symbol 
ID3367885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2748227 
End bp2749099 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID637652716 
Productsenescence marker protein-30 (SMP-30) 
Protein accessionYP_235447 
Protein GI66045606 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0343069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.816592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC TGCCCGTTTC CGAGCACCGC TTCAAGCTGG CCGAAGGCGC CTTCTGGGAT 
GCCGAGCAGC AGGCTTTGTA CTGGGTCGAC ATTGCCGGGT TTCTGGTGTG TCGTCTGGTC
GCCGGGCAGA TCCGCCAATG GCGCATGCCG GAGCCAGTCT CCGCATTTAT TCCGACCGAG
CAGGGTGATG CACTGGTGAC ACTGGCCAGC GGCGTCTATC GTTTGGACCT GGACTCCGAC
AAGACTTCCT TGCTGCCGTT CTGCGTGGCA GATCCCACAC CCGGCAATCG CGCCAACGAA
GCCAGGTGCG ATGCACGCGG CCACCTTTGG CTTGGCAGCA TGCAGAACAA CATCGATGCC
GAGGGCGGCG ACGTGCCTTT AGTGCGTCGT TCAGGCGGGT TGTTCCGCGT TGAACCTGAT
GCCCGGGTGA CTCGTTTGCT GGACGGGCAG GGCATCGTCA ACACCCTGCT GTGGAATGAA
GAGGGCAGTG TGCTGTACAG CGCCGATACC CTGGACGACG TCATTTATCA CTATCCGGTG
CTTGCAGACG GTGGTCTGGG GCCACGCAAG GTATGGGCGG CGAAACACGA TCGAGGCTCA
CCCGACGGCT CGGCGATGGA TGCCGAAGGG TATGTCTGGA ATGCGCGCTG GGGTGGCAAT
TGCCTGATCC GCTTTGCCCC GGATGGCAGC GTTGACCGGG TTGTCGAGCT GCCGGTCAGC
CATCCCACCA GTTGTGTATT CGGCGGTCCT GGCCTGGAGA CGTTGTACGT CACCAGTGCC
GCCCCTGCCG ATGCAAATGG TCGCTTCGAC GGCGCGCTGC TGATGGCGCA GGTTGGCGTC
AAGGGCACGC CGTGTCAGCG GTTCGCCGGT TGA
 
Protein sequence
MNWLPVSEHR FKLAEGAFWD AEQQALYWVD IAGFLVCRLV AGQIRQWRMP EPVSAFIPTE 
QGDALVTLAS GVYRLDLDSD KTSLLPFCVA DPTPGNRANE ARCDARGHLW LGSMQNNIDA
EGGDVPLVRR SGGLFRVEPD ARVTRLLDGQ GIVNTLLWNE EGSVLYSADT LDDVIYHYPV
LADGGLGPRK VWAAKHDRGS PDGSAMDAEG YVWNARWGGN CLIRFAPDGS VDRVVELPVS
HPTSCVFGGP GLETLYVTSA APADANGRFD GALLMAQVGV KGTPCQRFAG