Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2370 |
Symbol | |
ID | 3367885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2748227 |
End bp | 2749099 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652716 |
Product | senescence marker protein-30 (SMP-30) |
Protein accession | YP_235447 |
Protein GI | 66045606 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0343069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.816592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGC TGCCCGTTTC CGAGCACCGC TTCAAGCTGG CCGAAGGCGC CTTCTGGGAT GCCGAGCAGC AGGCTTTGTA CTGGGTCGAC ATTGCCGGGT TTCTGGTGTG TCGTCTGGTC GCCGGGCAGA TCCGCCAATG GCGCATGCCG GAGCCAGTCT CCGCATTTAT TCCGACCGAG CAGGGTGATG CACTGGTGAC ACTGGCCAGC GGCGTCTATC GTTTGGACCT GGACTCCGAC AAGACTTCCT TGCTGCCGTT CTGCGTGGCA GATCCCACAC CCGGCAATCG CGCCAACGAA GCCAGGTGCG ATGCACGCGG CCACCTTTGG CTTGGCAGCA TGCAGAACAA CATCGATGCC GAGGGCGGCG ACGTGCCTTT AGTGCGTCGT TCAGGCGGGT TGTTCCGCGT TGAACCTGAT GCCCGGGTGA CTCGTTTGCT GGACGGGCAG GGCATCGTCA ACACCCTGCT GTGGAATGAA GAGGGCAGTG TGCTGTACAG CGCCGATACC CTGGACGACG TCATTTATCA CTATCCGGTG CTTGCAGACG GTGGTCTGGG GCCACGCAAG GTATGGGCGG CGAAACACGA TCGAGGCTCA CCCGACGGCT CGGCGATGGA TGCCGAAGGG TATGTCTGGA ATGCGCGCTG GGGTGGCAAT TGCCTGATCC GCTTTGCCCC GGATGGCAGC GTTGACCGGG TTGTCGAGCT GCCGGTCAGC CATCCCACCA GTTGTGTATT CGGCGGTCCT GGCCTGGAGA CGTTGTACGT CACCAGTGCC GCCCCTGCCG ATGCAAATGG TCGCTTCGAC GGCGCGCTGC TGATGGCGCA GGTTGGCGTC AAGGGCACGC CGTGTCAGCG GTTCGCCGGT TGA
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Protein sequence | MNWLPVSEHR FKLAEGAFWD AEQQALYWVD IAGFLVCRLV AGQIRQWRMP EPVSAFIPTE QGDALVTLAS GVYRLDLDSD KTSLLPFCVA DPTPGNRANE ARCDARGHLW LGSMQNNIDA EGGDVPLVRR SGGLFRVEPD ARVTRLLDGQ GIVNTLLWNE EGSVLYSADT LDDVIYHYPV LADGGLGPRK VWAAKHDRGS PDGSAMDAEG YVWNARWGGN CLIRFAPDGS VDRVVELPVS HPTSCVFGGP GLETLYVTSA APADANGRFD GALLMAQVGV KGTPCQRFAG
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