Gene Psyr_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2366 
Symbol 
ID3367881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2744227 
End bp2744973 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID637652712 
ProductABC transporter 
Protein accessionYP_235443 
Protein GI66045602 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.133281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.385814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG CCATCGCTCT GGAAAACCTC ACGGTGGCGT ATGAACGCCG CCCGGCCGTA 
CACCACCTCA ACGGGCGCTT CGAGGCCGGT AGCCTGACGG CGATCGTCGG GCCCAACGGC
GCGGGCAAAT CGACGCTGAT CAAGGCCATT GCCGGCACCA TGAAGCCTGC TCAGGGACGC
GTCGACCGCG GGCGTCTGGC AACCCGCACG ATTGGCTATC TGCCGCAGGC CGCGGAAATC
GATCGCAGCT TTCCGCTGAG CGTTGCGGAT ACGGTTTCGA TGGGCGCCTG GCACAGCATC
GGCCCGTTTC GCAGCCTGAC CCGCAATCAC GCGCGTCTGA CCGGCGAGGC GCTGACGACT
GTCGGCCTTG AGGGTTTTGA AGGGCGTAGC GTGGGCTCGC TGTCGTCTGG CCAGTTTCAG
CGGGTGTTGT TCGCCAGGCT GCTGTTGCAG GACGCCTCGG TGATTCTGCT GGATGAGCCG
TTCACTGCCA TCGACGCGCG CACCACGCGT GATCTGTTGC AACTGGTGCG CGCCTGGCAC
GGGCAGGGGC GCACGGTGAT TGCCGTACTG CACGATATCG AACAGGTCCG TCAGCACTTT
CCGCAAACCC TGTTGATGGC TCGCGAAGCC ATTGCTTGGG GTGAGACCTC GCATGTGCTT
AGCGACGCCA ACCTGCGCAA GGCGCGCAAC ATGGCTGAAT ACTGGAGCCC GGATGCCTTG
TTGTGTGATG CCGAGGACGA CGCATGA
 
Protein sequence
MSAAIALENL TVAYERRPAV HHLNGRFEAG SLTAIVGPNG AGKSTLIKAI AGTMKPAQGR 
VDRGRLATRT IGYLPQAAEI DRSFPLSVAD TVSMGAWHSI GPFRSLTRNH ARLTGEALTT
VGLEGFEGRS VGSLSSGQFQ RVLFARLLLQ DASVILLDEP FTAIDARTTR DLLQLVRAWH
GQGRTVIAVL HDIEQVRQHF PQTLLMAREA IAWGETSHVL SDANLRKARN MAEYWSPDAL
LCDAEDDA