Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2362 |
Symbol | |
ID | 3367877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2739782 |
End bp | 2740627 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652708 |
Product | silent information regulator protein Sir2 |
Protein accession | YP_235439 |
Protein GI | 66045598 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.640546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.357121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGACA GCCCAATCCG AGATCTGCTC GACACGCTAT GCCAGGTAAT GGCCGACAAA CCGTTTCTGG TGGTGACCGG CGCAGGGATC AGCACCGCAT CCGGCATTCC GGACTACCGC GACAAGAATG GCGTGCGGCG CGGCAAGCAG CCGATGATGT ATCAGGAATT TCTCGGCAAC CCTGCAGCGC GCCAGCGCTA CTGGGCACGC GCCATGCTCG GCTGGCCGCG GATCCGCGCG GCACAGGCCA ATGCCGCGCA TCTGGCCCTG GCTGCGCTGC AGGCTGAACA CGCCATTACC GGACTGATCA CCCAGAACGT CGATGCACTG CACACACAGG CCGGAAGCCG GGACGTCATC GAACTTCACG GCAGCCTGCA CCGGGTGCTG TGTCTGGATT GCCAGCAGCG CAGCGACCGT GCAGGAATTC AAGAGCAGAT GCTGGCGCAC AACCTTTATC TGATCGGCGT CCACGCGACA CAGGCACCGG ACGGCGATAC CCTGCTAGAC CCGGCGTTCG AAGCCAGTTT CGAGGTGCCC CGCTGTCCGC ACTGTGGAGG CGACAGGCTC AAGCCGGACG TCGTGTTCTT CGGTGAAAAC GTCGCCGCGC AGACCGCTGC CAGGGCTACG CAAAGTGTCG AGGACGCAGA AGGTCTGCTG GTGGTGGGCA CGTCATTGAT GGCCTGGTCG GCATTCCGCC TGTGCAAGGC CATGGCCGAA CAGGGCAAAC CGGTCATCGC CATCAACCAT GGCAAGACCC GGGCGGACGA GCTGCTTGAA ATGAAGATCG AAGCGTCCTG TGAGCAGGCC TTGCCGTGGC TGGCCGAACA GTTGGTTTCG CCTTAG
|
Protein sequence | MLDSPIRDLL DTLCQVMADK PFLVVTGAGI STASGIPDYR DKNGVRRGKQ PMMYQEFLGN PAARQRYWAR AMLGWPRIRA AQANAAHLAL AALQAEHAIT GLITQNVDAL HTQAGSRDVI ELHGSLHRVL CLDCQQRSDR AGIQEQMLAH NLYLIGVHAT QAPDGDTLLD PAFEASFEVP RCPHCGGDRL KPDVVFFGEN VAAQTAARAT QSVEDAEGLL VVGTSLMAWS AFRLCKAMAE QGKPVIAINH GKTRADELLE MKIEASCEQA LPWLAEQLVS P
|
| |