Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2357 |
Symbol | |
ID | 3367872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2733823 |
End bp | 2734728 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652703 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_235434 |
Protein GI | 66045593 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.673893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.357121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTGT TTCAGGCAAT GCGCGTGTAC GTGAAAGTGG TCGAGGCAGG CAGCCTGACG GCAGCGGCGC AAGCGTGTTC GATTTCCACC ACCATGGTCG GCAATCACTT GCGCGCACTG GAAGAGCGCT TGGGCGTCAG CCTCTTGCAG CGCACCACAC GCCGTCAGCG ATTGACGGAA TTCGGTACCG CGTATTACGA GCGTTGCCTG GAAGTATTGG GGCTGGTGGC CGAGTCCGAG CAACTGGCCG AGCAGGCTCA TGGCGATCCC ACAGGTACGC TGCGCATCAC CGCACCACTG ACATTCGGTT CGGAAGTGCT GGCGCCTGCG CTGGTCGAAT TCTCGCGGCG TTTTCCCGAA GTCAGGCTCG ACCTTGTACT GACCAATCAA CGTCTGGACA TGATCGACAA TGGTTTTGAC GTCGCCATTC GCTTGGGCAA CATTCCAGAA TCGTCGCCAC TGATCGCCCG TCCCCTGCAG GATTACACCT TGACCATCTG CGCCGCGCCG GACTATCTCG CCCGCCACGG CACGCCGACC CATCCCGAGG ATCTTCGTGA GCATAATTGC CTGGCGTTCG CCTACCCGGC GGGAGACGAA TGGCGGACTG CCGGTACACA ATGGCGTATG ACCGGCGCAG ACGGCGACGT GCTGGTGGAG GTAAGCGGTT CGATGGTGGC CAACACTTCC GCCGGTCTTT ATCAGGCGGC TCGTGCAGGC ATGGGCGTCG TGATGCTTCC GGATGCACTG GTACAGCGCG ACCTGCAGGA AGGCCGGCTG TTTGCGTTGT TCCCGGACTA CCATTTGCCC CGACGACCGA TGAACCTGCT GTATGTGCAG GACCGTTATC GACTGCCCAA GCTGAGAAGT TTTGTGGAGT ACGCGACGGG GCTTTGGGGG CGGTAA
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Protein sequence | MDLFQAMRVY VKVVEAGSLT AAAQACSIST TMVGNHLRAL EERLGVSLLQ RTTRRQRLTE FGTAYYERCL EVLGLVAESE QLAEQAHGDP TGTLRITAPL TFGSEVLAPA LVEFSRRFPE VRLDLVLTNQ RLDMIDNGFD VAIRLGNIPE SSPLIARPLQ DYTLTICAAP DYLARHGTPT HPEDLREHNC LAFAYPAGDE WRTAGTQWRM TGADGDVLVE VSGSMVANTS AGLYQAARAG MGVVMLPDAL VQRDLQEGRL FALFPDYHLP RRPMNLLYVQ DRYRLPKLRS FVEYATGLWG R
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