Gene Psyr_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2338 
Symbol 
ID3367853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand- 
Start bp2715650 
End bp2716354 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID637652685 
Producthypothetical protein 
Protein accessionYP_235416 
Protein GI66045575 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0808147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.598155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAC AGCCCGCCAC TTCCAGCGTC AGCCCCAGGC ACCTGAGCAT GCAGAAATGG 
CGTGGCCGGG TCGGTATGGG GCTGGTTGCG AGCCTGTCGG TTCTGGCCGG CATGACCGAT 
GCCATCGGCT TCATGGCGAC CGGCGACTTC GTTTCGTTCA TGAGTGGCAA CACCACCCGG 
CTTGCCGTCG CGATCAGTGA TGGCGACCTG AGCGTGACGG TGCGTCTGAC CCTTGCAATC 
CTTGCTTTCA TTGCCGGCAA CGCGCTGGGC GTGGTGGTTG CGCGCCTTGG CGGGCGGCGC 
GCCCTGCCCC TGCTGCTGGG CATCGCCACG CTGCTGTGTG CCGCTGCCGC ATGGCCGCTG 
GAAAGCAATA TGCTCGCACT GATCTGGGCG ATTCTGGCCA TGGGCATGCT CAACGCCGCC 
GTCGAGCAGG TCAACGGGCT GCCGGTCGGC CTGACTTATG TAACCGGCGC GCTGTCGCGG 
TTCGGTCGTG GCCTGGGTCG CTGGATGCTC GGGGAACGCC GGGACGGCTG GCGCGTGCAA 
CTGGTCCCCT GGGTCGGCAT GTTCATCGGC GCCGTGATAG GTGCGCTACT CGAGCATCGC 
CTGGGACTCA ACGCCCTGTT GATCAGCGGC AGTCTGTCGA CGTTGCTGGG GCTGGTTTCG 
CTGAAAATCC CGCACCGCTG GCAACGTCAG TACATGCCAC GCTGA
 
Protein sequence
MLPQPATSSV SPRHLSMQKW RGRVGMGLVA SLSVLAGMTD AIGFMATGDF VSFMSGNTTR 
LAVAISDGDL SVTVRLTLAI LAFIAGNALG VVVARLGGRR ALPLLLGIAT LLCAAAAWPL 
ESNMLALIWA ILAMGMLNAA VEQVNGLPVG LTYVTGALSR FGRGLGRWML GERRDGWRVQ 
LVPWVGMFIG AVIGALLEHR LGLNALLISG SLSTLLGLVS LKIPHRWQRQ YMPR