Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2336 |
Symbol | |
ID | 3367851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2713737 |
End bp | 2714576 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652683 |
Product | regulatory proteins, IclR |
Protein accession | YP_235414 |
Protein GI | 66045573 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.477637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.60997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATT CCACTGATCG GAATAACGTG AAGGCCGAGG TCGGAGTGGG AGCCGTTTCC CGGCTGTTCG CGGTACTGCG CTGTCTGGGC GATTGTGATG AAGGCGGTGA GCGGGTCACG CAACTCGCCC AGCGTGTCGG GCTGTCGCAA CCCACCACAC ACCGCTTGCT GCGTAGCCTG ATGGAGGAGG GCATGGTCGA GCAGGATCTG CTCAGCAAAC GTTATCGGTT GAGCATCGAG TTCTTCGCCC TGGCCGCCAA GGCGGGTAAT ACCGGCAACC TGCGTGACGT GGTGCGCCCA AGCCTTTTGC GCCTGTCCGC CTCACTGGGT GACTCGCTGT TTCTGCTGGC ACGCAGCGGT TTCGACGCGA TCTGCCTGGA CCGCAGCGAA GGCCCGTACC CGATACGCAC GTTCACCGGC GACATCGGCG GCCGTGTTGC CTTGGGCGTC GGGCAGGGCA GTCTGGCGAT TCTCGCGTTT CTGCCCGAGG ACGAGCGGGA AACGGTCATT GCCTACAACC TGCCACGGCT CAAGGATTTT CACCTGTACG ACGAGGTGTT TCTGCGTTCG GAGGTGGAAA ACGTGCGGCG CCTGGGCTAC GCCGGGCGCA ACACCGGTGC GCTTCCGGGC ATGGCCGGGC TGGCAGTGCC GATCCTGGAC CGCAGCGGTC GTGCGGTGGC TGCGCTCAGT GTGGCGACCA TCTTCGACCG GCTGGGGCCG GATCGCCTGA TGACCGTGGT CGAACTGCTC AAGCGCGAAG CCACGGCCAT CAGTGCCAGA ATCAACCCGT TCGACCCGTC GCTGCGGCGG CCCAGCCAGG TGTTCGGGCA GGTTGATTAG
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Protein sequence | MDNSTDRNNV KAEVGVGAVS RLFAVLRCLG DCDEGGERVT QLAQRVGLSQ PTTHRLLRSL MEEGMVEQDL LSKRYRLSIE FFALAAKAGN TGNLRDVVRP SLLRLSASLG DSLFLLARSG FDAICLDRSE GPYPIRTFTG DIGGRVALGV GQGSLAILAF LPEDERETVI AYNLPRLKDF HLYDEVFLRS EVENVRRLGY AGRNTGALPG MAGLAVPILD RSGRAVAALS VATIFDRLGP DRLMTVVELL KREATAISAR INPFDPSLRR PSQVFGQVD
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