Gene Psyr_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2336 
Symbol 
ID3367851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2713737 
End bp2714576 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID637652683 
Productregulatory proteins, IclR 
Protein accessionYP_235414 
Protein GI66045573 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.477637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.60997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATT CCACTGATCG GAATAACGTG AAGGCCGAGG TCGGAGTGGG AGCCGTTTCC 
CGGCTGTTCG CGGTACTGCG CTGTCTGGGC GATTGTGATG AAGGCGGTGA GCGGGTCACG
CAACTCGCCC AGCGTGTCGG GCTGTCGCAA CCCACCACAC ACCGCTTGCT GCGTAGCCTG
ATGGAGGAGG GCATGGTCGA GCAGGATCTG CTCAGCAAAC GTTATCGGTT GAGCATCGAG
TTCTTCGCCC TGGCCGCCAA GGCGGGTAAT ACCGGCAACC TGCGTGACGT GGTGCGCCCA
AGCCTTTTGC GCCTGTCCGC CTCACTGGGT GACTCGCTGT TTCTGCTGGC ACGCAGCGGT
TTCGACGCGA TCTGCCTGGA CCGCAGCGAA GGCCCGTACC CGATACGCAC GTTCACCGGC
GACATCGGCG GCCGTGTTGC CTTGGGCGTC GGGCAGGGCA GTCTGGCGAT TCTCGCGTTT
CTGCCCGAGG ACGAGCGGGA AACGGTCATT GCCTACAACC TGCCACGGCT CAAGGATTTT
CACCTGTACG ACGAGGTGTT TCTGCGTTCG GAGGTGGAAA ACGTGCGGCG CCTGGGCTAC
GCCGGGCGCA ACACCGGTGC GCTTCCGGGC ATGGCCGGGC TGGCAGTGCC GATCCTGGAC
CGCAGCGGTC GTGCGGTGGC TGCGCTCAGT GTGGCGACCA TCTTCGACCG GCTGGGGCCG
GATCGCCTGA TGACCGTGGT CGAACTGCTC AAGCGCGAAG CCACGGCCAT CAGTGCCAGA
ATCAACCCGT TCGACCCGTC GCTGCGGCGG CCCAGCCAGG TGTTCGGGCA GGTTGATTAG
 
Protein sequence
MDNSTDRNNV KAEVGVGAVS RLFAVLRCLG DCDEGGERVT QLAQRVGLSQ PTTHRLLRSL 
MEEGMVEQDL LSKRYRLSIE FFALAAKAGN TGNLRDVVRP SLLRLSASLG DSLFLLARSG
FDAICLDRSE GPYPIRTFTG DIGGRVALGV GQGSLAILAF LPEDERETVI AYNLPRLKDF
HLYDEVFLRS EVENVRRLGY AGRNTGALPG MAGLAVPILD RSGRAVAALS VATIFDRLGP
DRLMTVVELL KREATAISAR INPFDPSLRR PSQVFGQVD