| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2322 |
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| Symbol | |
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| ID | 3367837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2698342 |
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| End bp | 2701083 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637652669 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_235400 |
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| Protein GI | 66045559 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.330208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTT CTTTCTTGCG GAAGGCTGCA GTAGGTATTG CCTGCGCCTG GCTGGCATGT
TCTGCCCAGG CCGGCACGAT CAGCCGAACC TATACAGCGC TTGGGCAGGT CGCAAGTATC
GATGGTGCGC GTACTGACGT GAATGACGTC ACTCAGTACG CATACGATGC TCAAGGCAAC
CTTACTACTG TGACCAACGC GCTGGGTCAG GTCTATGCGC TTGCCAGTTT TGACAGTTAC
GGCAATCCAC AAAGCATCAC CGACCCAAAC GGGGTGATGA CAACGCTCAG CTACACCCCG
CAAGGCTGGC TTGCGAGCCT TACGATTGAC TCGTCGACGA CTCAGTATGC CTACAACGAA
GTTGGTGATC TGTTGCAGGT CACCACCGCT GATGGCAACT GGGTCAAGTA CAGCTATGAC
GATGCCCGCA GGCTTATCGG TGTGCGTAAT CGGCTTGGCG AGAGTATCAA TTACACCCTC
GACCCAATGG GTAACCGGAC GGCAGAGCGG ACCAAAGACG CTAATGGAGC CGTGGTCCAT
CTTCAGCGTC GAGTATTTGA TGAATTAGGT CGTCTGATCC GGGTAGTGGG TGCTGGTGAT
CAGACGCAGC GTTATGGCTA TGACCTGAAC GACAATCAGT CGAGTGATAC CACGCCGCGT
AATAACAAAA CGCAGCAGGC GTTCGATGCT CTGAATAGGG TCAGCAAGAT TGTCGATCCT
TTGCAGGGCG TGACTGCCTT GGGTTACAAC TCGGATGACA AGGTCACCAA AGTGGTTGAC
CCTCGTGGCG TGACGACGCT GTACACCTAC GACAGTCTAG GAAACCGGAT CAGTAGCAAA
AGCCCTGATG GTGGGACCAG CACTTACGCC TACGACGAGG CCAACAATCT CATTCGCAGC
ACTGATGCAC GTGGGGTTGT GACCGAGTAC GCCTACGATG CGCTCAATCG CCTGACCAGC
AAAAGCTATC CCGCCACACC TGCGCTCAAT ATCAAGTTTC TCTACGACCA GACCGCTGAT
GGCAATCTCG GGATTGGCCA CCTGACAGGG CTACAGGACA GCGCTGGTGT TCTGACGTAT
ACCTACGACG CCAAGGGCAA TCTGGTCAGG CAGCACCGCT CGGTGGGCGT CAACAGCGGT
GACTATTACG AAACACTGAA TTACGGTTAT GACGCCGCCC GTAATCTGGT GCAGATTGGC
TATCCATCGA ATATCAACTT GACCTTCACC CGCAATAGCG CGGCACAGGT AACAGGCGTC
AAACTGGCCA TTGGCAACAA GACAGCGACG CTGGCAAGTA ACATTTCCTA CCAGCCATTC
GGCCCAGTTA ATTCGCTGAC CTGGGGCAAC GGTATCCTGC TGTCGAGAAC CTATGACCAG
GATTATCAAC TGACCCAGCA GCAGGTCGGT AACTGGCAGA CGACTTATCG TTACGACGCT
GACAGCAACA TTTCCGAAAC GGCCACCAGC CTGTGGGGCG CGGTCCAGTA TGAATATGAT
GCGCTGGGCC GTCTGACTCA GGAGCAAACC AACAGCGTCA AAAAGGCTTA CAGCTTCGAC
GCTACGGGCA ACAGGACTCA GCGTACCACC ACCAATCTGA CCACAAGCGA TGCCACTGAG
ACTCAGTCTT TAACCTATGC CAGCGACAGT AACCGGGTGA CCAGCATTAA TGGCTCCACA
CTGCCTGTGG ACGCTGCGGG TAACCACACG CAGATCAATG GCCGTCGATT CACCTACGAC
AGCCAAGGCC GTCTGAGCGA GGTTTATCAG GCAAACATCT ACAAAATTGC CGACTACAAG
TACAACGCGC TTGGCCAGCG AATCATCAAG CGCGCTTACG TGATGGGAAG CCAGGCGTTG
GCGGGCACAA CCACCTACCT TTACGACCCG AGTGGCAAAC TGATCGGCCA AACGTTATAT
GACGGAAACG GCCAGAAAAC CAGCGGCCAA TACTGGTTCT GGCTGGACAA CATGCCACTG
GCACAGTTGA CAGCCAACTT CTCCACGCTG GGCGAGGTAA GCAGCAGCAA ACTGATTTAC
CTGCATGTCG ATCACCTGAA CACGCCAAGA CTGGCAACAG ACAGTTCTCA GGCGCTGCTA
TGGCGTTGGA ACAGCGATGC GTATGGAGTC GGATCACCCG AGGAAGATGT GGACGGTGAT
GGCAAGGCCA CAACCATCGC GCTGCGGTTT CCGGGACAGA TTTACGATGC GCAAACGCAG
CTGAGTTATA ACTATTATCG GGATTACAAT CCGGACACTG GGCGGTATGT GCAGAGTGAT
CCGATTGGGT TGGGGGGCGG TCTCAATACA TATGCTTATG TTAATGCCAA TCCTATGTCA
TTTATTGATC CTATGGGGTT AGCGGCAACT GCATTACCAA CTTGGTTTGA TAGTATTCCA
GATCTGATAC CCCAAGTTGG GAGAGGTGTT GGCTTAGGCT TTGGTGCTGG GGTGTCATGC
TTACTTTACT CACCCACGTT AGGAAACGGT GAGTGCCCTC CAGGTGGTTG CTATTATAGT
GAGTCAGCAG AAAACAGTGC TGATCAACCC GACGAGAACA ATTTAGATAA ATTGAGTAGC
AATAAAGCTG CAGATGCTGC GGCCCGAGAA GCTGGGTACG AAGATGCTCA CGATGCCAAA
AAGGGCGAGG GTGATTCAAA AGTAAATATA TACAACGATA AAACTACGGG CTTTAAATGG
CTTTGGAATG GAAAAAGCGG ATCGAGTAAA AACCCATTAT GA
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| Protein sequence | MTVSFLRKAA VGIACAWLAC SAQAGTISRT YTALGQVASI DGARTDVNDV TQYAYDAQGN
LTTVTNALGQ VYALASFDSY GNPQSITDPN GVMTTLSYTP QGWLASLTID SSTTQYAYNE
VGDLLQVTTA DGNWVKYSYD DARRLIGVRN RLGESINYTL DPMGNRTAER TKDANGAVVH
LQRRVFDELG RLIRVVGAGD QTQRYGYDLN DNQSSDTTPR NNKTQQAFDA LNRVSKIVDP
LQGVTALGYN SDDKVTKVVD PRGVTTLYTY DSLGNRISSK SPDGGTSTYA YDEANNLIRS
TDARGVVTEY AYDALNRLTS KSYPATPALN IKFLYDQTAD GNLGIGHLTG LQDSAGVLTY
TYDAKGNLVR QHRSVGVNSG DYYETLNYGY DAARNLVQIG YPSNINLTFT RNSAAQVTGV
KLAIGNKTAT LASNISYQPF GPVNSLTWGN GILLSRTYDQ DYQLTQQQVG NWQTTYRYDA
DSNISETATS LWGAVQYEYD ALGRLTQEQT NSVKKAYSFD ATGNRTQRTT TNLTTSDATE
TQSLTYASDS NRVTSINGST LPVDAAGNHT QINGRRFTYD SQGRLSEVYQ ANIYKIADYK
YNALGQRIIK RAYVMGSQAL AGTTTYLYDP SGKLIGQTLY DGNGQKTSGQ YWFWLDNMPL
AQLTANFSTL GEVSSSKLIY LHVDHLNTPR LATDSSQALL WRWNSDAYGV GSPEEDVDGD
GKATTIALRF PGQIYDAQTQ LSYNYYRDYN PDTGRYVQSD PIGLGGGLNT YAYVNANPMS
FIDPMGLAAT ALPTWFDSIP DLIPQVGRGV GLGFGAGVSC LLYSPTLGNG ECPPGGCYYS
ESAENSADQP DENNLDKLSS NKAADAAARE AGYEDAHDAK KGEGDSKVNI YNDKTTGFKW
LWNGKSGSSK NPL
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