Gene Psyr_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2311 
Symbol 
ID3367826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2685002 
End bp2685859 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID637652661 
Producthypothetical protein 
Protein accessionYP_235392 
Protein GI66045551 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.869826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTG TCACCGGTGC CACCGGCCAG CTTGGCCGCC TCGTCATTGA ACAGTTGCTC 
AGCCGCGTAC CCGCTTCGCA AATCATTGCC GCGGTGCGCA GTCCGGAAAA AGCCGCCGAT
CTGTCCAGGC AGGGCATTCA GGTTCGTCAG GCCGACTATT CACAGCCTGC GACACTGGAC
AGCGCATTTG CCGGCGCCGA CAAGGTGCTG CTGATTTCGT CCAGCGAAGT GGGCCAGCGT
TTGCCGCAGC ACAAGGCGGT AATCGATGCA GCCAAACGTG CCGGGGTCCA GCTGCTGGCC
TACACCAGTG TTCTGCATGC CGACACCTCG GCGCTGAGCC TGGCCAAAGA GCACCGCGAA
ACCGAAGATT ACCTGCGCGC CAGTGGCCTG CCCTTCGCCT TGCTGCGCAA TGGCTGGTAC
ACCGAGAACT ACACGGCGGG CATTCCCGGC GCGCTGGCGC ATGGCGCGGT CATGGGCAGT
GCCGATGAGG GCCGTATCAG CTCTGCTTCA CGTCTGGATT ACGCCGAAGC GGCCGCTGTG
CTGCTGACTT CGGAAACGAC ACAAGCCGGT AAAGTCTATG AACTGGCAGG CGATGAGTCC
TACACGCTGT CCGAATTTGC GGCGCAGTTG TCTACGCAGA GCGGCAAGTC CCTGCCTTAC
GTCAACCTGC CACAGGCCGA ATTCGAGGCC GCGCTTATCC AGGCAGGCCT GCCGGACTTC
GTGGCCCAGT TGCTGGCCGA TTCCGATGCC GCTGCTGCCA AGGGCGCCCT GTTCGATGAC
AGTCGCCAGT TGAGCGCGCT GATCGGCCGC CCGACCACCC CGCTCTCGGC AACCATCGCC
GAGACACTGA AAGGCTGA
 
Protein sequence
MIVVTGATGQ LGRLVIEQLL SRVPASQIIA AVRSPEKAAD LSRQGIQVRQ ADYSQPATLD 
SAFAGADKVL LISSSEVGQR LPQHKAVIDA AKRAGVQLLA YTSVLHADTS ALSLAKEHRE
TEDYLRASGL PFALLRNGWY TENYTAGIPG ALAHGAVMGS ADEGRISSAS RLDYAEAAAV
LLTSETTQAG KVYELAGDES YTLSEFAAQL STQSGKSLPY VNLPQAEFEA ALIQAGLPDF
VAQLLADSDA AAAKGALFDD SRQLSALIGR PTTPLSATIA ETLKG