Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2304 |
Symbol | |
ID | 3367819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2678583 |
End bp | 2680001 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652654 |
Product | major facilitator transporter |
Protein accession | YP_235385 |
Protein GI | 66045544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.759044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.046264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCAT TACCCCATGC CGAGGCAGCC GCGAACGAGC CGTTGCGGGC AGCGTACATC TCGGCGCGTA TTGACCGACT GCCTGCGGTC GCGACCATCT GGCGACTGGT CGCCCTGCTG TCCATCGCCG GCTTTTTCGA GCTCTACGAC CTGTTCCAGA CCGCCTACAT CAGTCCCGGC CTGATTCGCG ACGGGATCTT CGCCACCGGC AGTCAGGGTC TGTTCGGCTT TTCCGATCAG GCAGCCTTTG CTTCGGCAAC CTTTCTGGGA CTGTTTTTCG GAGCCAGCCT CGTCAGCCCG ATTGCCGATC GTTACGGACG CCGCGCGATC TTCACCTTCG CGCTGATCTG GTACACCGTT GCCACCGTGA TCATGGGCCT GCAGACCTCT GCGCTGGGCG TGATAGGCAT GCGCTTCGTC GTGGGTATCG GCCTGGGGGT CGAGTTGGTC ACCATCGACA CCTACCTGTC GGAACTGGTG CCCAAGCGCA TACGCAGTTC GGCGTTCGCC TTTGCCTTCT TCATTCAGTT TCTGTCAGTG CCCAGCGTCG CGCTGATGTC ATGGTGGCTG GTGCCCCAGG ACCCTTTCGG TTTTTCCGGC TGGCGCTGGG TAGTGATCAG CAGTGCAGTC TTCGCCCTGT TCGTCTGGTG GCTGCGCTCG GCGCTGCCGG AATCGCCGCG CTGGCTGGCA CAGAAGGGAC GCTTCGATGA AGCCGAGCGC ATCATGGACG GCATTGAAGC ACGCTGTATC AGAGACCACG GCAAGCCCTT GGATGAGCCT GAACCGGAAA ACGTAGCGCT GTCAGGCAAC GGTCGATTTG CCGACATGTG GCAGCCACCC TATCGTCGCC GCGCCTTGAT GCTGATCGTG TTTCACGTTT TTCAGGCCAT CGGTTTCTTT GGCTTCGGCA ACTGGCTGCC TGCCCTGCTC TCGGGTCAGG GCCTGAGCGT CACCCACAGC CTGGCCTATG CGTTCGTGAT TACGCTGGCT TATCCGCTGG GGCCGTTACT GTTCGTGAAG TTTGCCAACC GCTTCGAGAA CAAATGGCAA ATCGTCGGCT CAGCATTGGG CGCGATGATC TTCGGCAGCC TGTTCGCCTT TCAGACCAGC GCGGCAGGAC TGATTTTCTG CGGGATCATG ATCACGTTCT GCAACGCATG GCTGAGCTTC AGCTACCACT CGTATCAGGG TGAGCTGTTC CCGACCAACA TCCGCGCTCG CGCAGTGGGC TTCTGTTACT CGTTCAGCCG ACTGTCAACG GTGTTCAGCA GCCTGCTGAT CGGGATATTT CTCGACCACT TCGGCACGCC GGGCGTACTG GCCTTCATCG TCGGCAGCAT GTTGATCGTG ATCGTCACCA TCGGCCGGTT CGGGCCACGC ACACGCAATC TTGCGCTGGA GCAGATCGCT CACCGCTGA
|
Protein sequence | MTSLPHAEAA ANEPLRAAYI SARIDRLPAV ATIWRLVALL SIAGFFELYD LFQTAYISPG LIRDGIFATG SQGLFGFSDQ AAFASATFLG LFFGASLVSP IADRYGRRAI FTFALIWYTV ATVIMGLQTS ALGVIGMRFV VGIGLGVELV TIDTYLSELV PKRIRSSAFA FAFFIQFLSV PSVALMSWWL VPQDPFGFSG WRWVVISSAV FALFVWWLRS ALPESPRWLA QKGRFDEAER IMDGIEARCI RDHGKPLDEP EPENVALSGN GRFADMWQPP YRRRALMLIV FHVFQAIGFF GFGNWLPALL SGQGLSVTHS LAYAFVITLA YPLGPLLFVK FANRFENKWQ IVGSALGAMI FGSLFAFQTS AAGLIFCGIM ITFCNAWLSF SYHSYQGELF PTNIRARAVG FCYSFSRLST VFSSLLIGIF LDHFGTPGVL AFIVGSMLIV IVTIGRFGPR TRNLALEQIA HR
|
| |