Gene Psyr_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2303 
Symbol 
ID3367818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2676459 
End bp2677910 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content59% 
IMG OID637652653 
Producthypothetical protein 
Protein accessionYP_235384 
Protein GI66045543 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.223349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0447884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGTA TTCAAGGAAG AATTCTTGAG GTTCATACAC CGCTGGTTGT CGACCTCGAC 
GGAACATTGC TGCGATCTGA CATGCTGTTT GAAACCGCCG TGGCGTTTAT CCGTGGTCAT
CCGTTAAAGC TGTTCAGTCT TTTCGCCTGG CTGCTGCAGG GCAAGGCGTC TCTCAAGCAA
GGCCTGGCGC TGGGTACCGA CATTGACGTT GCGTTACTGC CGTTCAACGC TGACGTCATT
GATTACATTC AGACCGAGCG GCAGACCGGT AGAAGCGTGA TTCTGGCCAC CGCCTCGCAC
GAAACCCTCG CCAACCGGAT CGCGGCACAT CTGCAACTGT TCGATCATGT GTGGGCCTCG
GACGGTAGAA CCAACCTTTC CGCGCATCGT AAACGCGATT TGCTGGTTAG CCACTATGGT
GAGCAGGGCT TCGATTACAT CGGCAACTCC CGGGACGATC TGTGCATCTG GGGTGTCTCA
CGCAAGGCCA TCGTCGCCAG CCCGCTTGCC GGCGTGGAGC GCAAGGCGCG GGCACAAGGC
AATGTCGAGC AGGTTATCCA ATCGGCAACG TCCGGGACCA GCGCCTGGCG CAAGGCGCTG
CGCCTGCACC AATGGCTGAA GAACGCGCTG ATTTTTGTGC CCCTGCTGGC TGCCCATCAG
GTCCAGAACA CGCAGTTGCT GCTCGACGGT TTGCTGGCCT TTCTGTGTTT CGGGCTGTGC
GCATCCAGTG TATACCTGCT CAACGACCTC CTTGACCTGG CAGACGACCG CCACCACAGA
AGCAAGCGCG AGCGCCCGTT CGCCAGTGGT GCGCTGTCGA TAAAATCCGG CCTGCTGGTC
ATACCGCTGT TGCTCGCCGC AGCCTTCTCC GCTGCGGCAA CAGGATTGCC GTGGCAGTTT
TCGGCGGTGC TGGCAGCCTA TTACCTGCTG ACGCTGGTTT ATTCGCTTTA CCTCAAGCGC
CACATGGCCG TCGACGTCAT CGTTCTGGCG ATGCTCTATA CCACGCGCAT CCTGGCCGGT
GCGGCAGCGT TTCAATTGCC ACTGACGTTC TGGATTCTGG CGTTTTCGAT GTTTCTGTTT
CTCAGCCTGG CGCTGGTCAA GCGCTATGCC GAACTGCGCG AGGCACGACT GCGCGCTGTA
ACAGGCAAGA CGGCTGGCCG TGGTTACTAC CCGGGCGATC TGGACATGAT CGCCTCGTTG
GGGGCCTCGT CAGGCAATCT GGCAGTGATG GTGCTGGCGC TTTACATCCA TGAAGGTGCG
ACGGTGGCCT TGTATCAGCA CCCGCACGTT ATCTGGCTGG CCTGCCCATT GCTGTTGTTC
TGGATCACCC GGATCTGGAT GCTCACCCAT CGCGGCGAAA TGAACGAGGA CCCGGTGGTT
TTCGCGATTC GCGACCGGAT CAGCCAGGGG ATCGGCTTGC TGTTCCTGCT GGTGTTCTGG
GTCGCAGCAT GA
 
Protein sequence
MPGIQGRILE VHTPLVVDLD GTLLRSDMLF ETAVAFIRGH PLKLFSLFAW LLQGKASLKQ 
GLALGTDIDV ALLPFNADVI DYIQTERQTG RSVILATASH ETLANRIAAH LQLFDHVWAS
DGRTNLSAHR KRDLLVSHYG EQGFDYIGNS RDDLCIWGVS RKAIVASPLA GVERKARAQG
NVEQVIQSAT SGTSAWRKAL RLHQWLKNAL IFVPLLAAHQ VQNTQLLLDG LLAFLCFGLC
ASSVYLLNDL LDLADDRHHR SKRERPFASG ALSIKSGLLV IPLLLAAAFS AAATGLPWQF
SAVLAAYYLL TLVYSLYLKR HMAVDVIVLA MLYTTRILAG AAAFQLPLTF WILAFSMFLF
LSLALVKRYA ELREARLRAV TGKTAGRGYY PGDLDMIASL GASSGNLAVM VLALYIHEGA
TVALYQHPHV IWLACPLLLF WITRIWMLTH RGEMNEDPVV FAIRDRISQG IGLLFLLVFW
VAA