Gene Psyr_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2300 
Symbol 
ID3367815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2673444 
End bp2674412 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID637652650 
Producthypothetical protein 
Protein accessionYP_235381 
Protein GI66045540 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0170913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00842153 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGGCT CGCTGTTGCT GTCCGGATGG CGCTATCGGA CAGTGCTTCT GTCGATCGTC 
GTCTCGGCCA TGGGGTATCT GGGTTTCTCG CTGTGGGGCG GCTGGCAGGC GGTCAGCGCA
GCCACGGGCA AGGTCGGGCT GCTCGGCATC AGCGTGGCGT TGTTGATGTC TGCAATCAAC
TACGCGCTGC GCTTCGTCCG CTGGCAACTC TACCTTTCAG TGTTGGGGCA TCCGTTGGCC
TGGCGAAAAA GCCTGCGGAT CTATCTGGCT GGCTTCGCCC TGACCACGAC TCCCGGCAAG
GCCGGTGAAG CGCTGCGTGG CGTGTTGCTC AGGCCGCTGG GCGTGCCGTA CCCGCAAAGC
TTTGCCGCGT TTGTCAGCGA GCGTCTTTCC GATCTGCTGG CCATCGTACT GCTCACGCTG
TTCGGCCTGT CGTGGTATCC GCAGGCGCAG CCAATGATCC TGCTCGGCCT GGCACTGGTT
CTGACGGGCT CGCTGGTGCT GTCTCGCCGT CACTTGCTGG AGCGTTTACA GGCTTCACTG
CCCACAAAAA ACACGCGCGT CAGTAGCCTG TGGCAGCAGC TGTTCAACGT GCTGCTTGCG
GCTCGCCAGT GCCTGCATGG CAACGTGCTG CTGACCGCCA GCCTGCTCAG TCTGCTGGCC
TGGAGCGCCG AGGCACTGGC GTTTTACTGG ATGCTTGGCT GGATGGGCGC ACAGATCCCG
CTGACCTTTG CCGTATTTAC CTACGCACTG GCGATGCTCG CGGGAGCATT GAGCTTCATG
CCGGGCGGGC TGGGCAGCGC CGAAGCGGTG ATGGTCGGGC TGCTGATGTT CAAGGGCATG
CCGGGGGCGG ATGCGGTGGC TGCCACAGTG CTGATACGTC TGGCGACCCT GTGGTTTGCG
GTGGCCATCG GCGCCGTGAT GCTCTCGCGC TTTACCGGCG CGAAACCCGT ACCGAATCCT
CAGTCTTGA
 
Protein sequence
MSGSLLLSGW RYRTVLLSIV VSAMGYLGFS LWGGWQAVSA ATGKVGLLGI SVALLMSAIN 
YALRFVRWQL YLSVLGHPLA WRKSLRIYLA GFALTTTPGK AGEALRGVLL RPLGVPYPQS
FAAFVSERLS DLLAIVLLTL FGLSWYPQAQ PMILLGLALV LTGSLVLSRR HLLERLQASL
PTKNTRVSSL WQQLFNVLLA ARQCLHGNVL LTASLLSLLA WSAEALAFYW MLGWMGAQIP
LTFAVFTYAL AMLAGALSFM PGGLGSAEAV MVGLLMFKGM PGADAVAATV LIRLATLWFA
VAIGAVMLSR FTGAKPVPNP QS