| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2298 |
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| Symbol | |
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| ID | 3367813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2670080 |
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| End bp | 2671906 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652648 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_235379 |
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| Protein GI | 66045538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000521372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTGACT TTCCCGCAGA GGCGCAAAAC CGTATCGAGG ATCACGGCAT CATCGGCGAC
ATGCGCAGTG CTGCGCTGAT TGCCAACACC GGCAGCATCG ATTTCTGCTG CTGGCCGGAC
TTCGACAGCC CGTCGATTTT CACCGCGCTG CTGGACACCC CCGACGCCGG GATCTTTCAG
CTGGCGCCCG ATCTGCCTGA CGCCAGGCGG CTGCAGATCT ATCTGCCGGA TACCAACGTC
CTGCAAACCC GCTGGATCTC CGAGGACGCG GTGGTGGAAG TCACCGACCT GATGCCGATC
GGCGAAGATC AGGATGATCT GCCGCGTATC GTGCGCCGCG TCCAGGTGCG TTTTGGCGAG
GCCACGCTGC GCATGCGCTG CCGGGTGCGC ATGGATTACA GCCGTGCCCA CACCACCGCA
CGAGTCGATG GTCAGGACAT CTGTTTCGAA GCCGCCGGGC AACCGGGCAT GCGTTTGTCG
GCAACGACGC CGTTGCGTCT CGAGCAGCAC GACGCCGTGG CCGAATTTCA TATGCACAAG
GGCCAGACCA TCGAGTTCAT TCTCGGCGGA ATCGATGATT CGAATGTCGC TGCTGGCCGC
TGCTCGCGCT ATTTCGATGA CACCTTGAAG TTCTGGCGGC GCTGGTCCGG GCAATCGCAA
TACACCGGGC GCTGGCGTGA AATGGTCACT CGTTCGGCGC TGGCCCTCAA GCTGCTGACC
TCGCGCAAGC ATGGCGGCAT TGTTGCCGCT GCGACGTTCG GTTTGCCGGA AACCGAGGGC
GGCGAGCGCA ACTGGGATTA CCGCTACACC TGGATACGTG ACGCGTCGTT CACCGTGTAT
GCATTCATGC GCCTGGGCTA CACCGATGAA GCCAATGCCT TCATGAGCTG GGTACGCGGA
CGACTGGATG ACTGCTGCGA ACAGACCGAG AAGCTCGGCA TTCTCTATGC GCTGGATGGC
CATGCAGAGC TGCCGGAAGA GCATCTCGAT CACCTGTCCG GCTACGGCGG TGCGCAGCCG
GTACGTATTG GCAACGAAGC GTACAAGCAG GTTCAGCTGG ACATCTACGG CGAGCTGATG
GACGCCGTGT ACCTGGCCAA CAAATACGGC GACGCCATCT CCCATGACGG CTGGCAGCAT
GTGGTGCGCC AGGTCGACTA TGTGTGCGAG CACTGGAACG ACCGGGACGT GGGTATCTGG
GAAATGCGCG GCGGCGATCA GCACTTCCTG CACTCGCGGC TGATGTGCTG GGTAGCGCTG
GACCGGGCAC TGCGCCTGGC CTTCAAGCGT TCGCTGTCGG GGCCGTTCGA ACGCTGGACC
AAGGTGCGCG AGGAGATCCA CAACGATATC TGGAAGAACT TCTGGAACGA CGACCTGGGT
CACTTCGTGC AGCACAAGGG CAGCCGCAAT CTGGATGCCT CGATGTTGCT GATGCCATTG
GTACGTTTCG TCGGTGCCAA CGATCCCAAG TGGCTGGCGA CGCTGGATGC CATCGAGGCC
GCGCTGGTGC GTGACGGGAT GGTGTTCCGT TACCGCAACG ACGACGATCA TGATGACGGT
CTGGCAGGTG AAGAGGGCGC CTTCGTGGCT TGCTCGTTCT GGTACGTCGA GTGTCTGGCC
CGTGCCGGCC GGGTCGAACA GGCGCATCTG GAGTTCGAGC AGTTGCTGCG CTACGCCAAT
CCGCTGGGCT TGTACGCCGA GGAATTCGAC GCGCATGCTC ATCACCTCGG CAATACGCCG
CAGGCCCTGA GCCATCTGGC GCTGATCAGT GCGGCCAGTT TTCTGGACCG CAAACTGGGC
GGTGGACAGG CGCTCTGGCA GCCTTGA
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| Protein sequence | MADFPAEAQN RIEDHGIIGD MRSAALIANT GSIDFCCWPD FDSPSIFTAL LDTPDAGIFQ
LAPDLPDARR LQIYLPDTNV LQTRWISEDA VVEVTDLMPI GEDQDDLPRI VRRVQVRFGE
ATLRMRCRVR MDYSRAHTTA RVDGQDICFE AAGQPGMRLS ATTPLRLEQH DAVAEFHMHK
GQTIEFILGG IDDSNVAAGR CSRYFDDTLK FWRRWSGQSQ YTGRWREMVT RSALALKLLT
SRKHGGIVAA ATFGLPETEG GERNWDYRYT WIRDASFTVY AFMRLGYTDE ANAFMSWVRG
RLDDCCEQTE KLGILYALDG HAELPEEHLD HLSGYGGAQP VRIGNEAYKQ VQLDIYGELM
DAVYLANKYG DAISHDGWQH VVRQVDYVCE HWNDRDVGIW EMRGGDQHFL HSRLMCWVAL
DRALRLAFKR SLSGPFERWT KVREEIHNDI WKNFWNDDLG HFVQHKGSRN LDASMLLMPL
VRFVGANDPK WLATLDAIEA ALVRDGMVFR YRNDDDHDDG LAGEEGAFVA CSFWYVECLA
RAGRVEQAHL EFEQLLRYAN PLGLYAEEFD AHAHHLGNTP QALSHLALIS AASFLDRKLG
GGQALWQP
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