Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2290 |
Symbol | |
ID | 3367805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2659700 |
End bp | 2662102 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652640 |
Product | TonB-dependent receptor:TonB-dependent receptor |
Protein accession | YP_235371 |
Protein GI | 66045530 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000569019 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGGAATT TCAAACGCAG TGTATTGGCC ACGGCGATTT TTTCAGCCAA TTTGCTGAGC GTCGCGGGCA TCAGTGCAAG TGCATTCGCC GCAGAAGCGA CAGATGAAGC AAACACTCAG GGTGCGTCCA CCCTGGGTAC AGTGATCGTG ACCGGCACCC GTGCGCAGGA GCGTACCGCC AGCGCCTCGC TGTCGCCTAT CGATGTGATT TCCGGTGACA GCCTGCGCAG TTCCGGCTCC AGCGAACTGG GCACCGTGCT GGCACGTTTG ATCCCTTCGA TCAATTTCCC CCGGCCGAGC CTGGTGGACG GTGCGGAGCT GACGCGTCCG GCGCAACTGC GCGGCCTGTC GCCGGATCAG GTGCTGGTGC TGGTCAATGG CAAGCGCCGC CATACATCCG CCTTCGTCAA TCTGGGCGGG GCGGTCGGAC GCGGTTCGGC ACCTGCCGAC CTGAATGCCA TCCCGCTGTC GGCCATCGAC CATATCGAAG TCCTGCGCGA CGGTGCGTCG GCACGTTACG GGTCCGATGC CATCGCCGGG GTGATCAACA TCATTCTCAA AAGCGCCGAC CACGGCGGGT CGATTTCCAG CCAGTACGGC CAATACAAGA AGGGCGACGG GATCCAGCGC CAGGTGTCGG GCAATACCGG TTTTGCTTTA GGCGACAATG GCACGTTCAA CCTTTCCGGT GAAGGTGCCA ACAATGACTA CACCAACCGT GCCGGTGACG ACTTTCGAGC GTCCAGTGTC GGGTCCACCA CTTACGGTCA GCAGGTGTTT CGCCAGGGCG AGCCACAGAC GCACGAGGGC AAGCTGCAGT ACAACGCTGA ATACAGCTTC AATGATGCGG CGGAGTTCTA TAGCTTCGGG GGCTACAGCA AGAGGCGTGG CGAAACCGCC GGATTTTATC GGCCGAGCAA TGCCTCGAAT AACATTGCGG CGATTTATCC CAACGGCTAT CTGCCGCTGA TCAATGGCAC GCTCGAAGAC ATCTCGCTGG TCGCGGGCCT GCGCGGAGAG CTGGCGTATG ACTGGCACTA CGACGTGTCC GCCAACTATG GCAAAAACTC CTATGAGCTG CGCACCAAAA CCATCAACAC CTCATTGGGA CTGAACACGC CGCGCTCGTT CTACAACGGC ACGCTGACCA ATGATCAGAA GCAACTGAGC CTCGATCTGT CTAGAGAATT CAATACAGCG TGGTTGCCTT ACCCGGTATC GGTTGCGTTT GGCGCGGAAT ACCTGCGTCA GGGCTATCAG ATCGAGGCAG GGCAAGCGGA GTCGTATTTC CAGACCGGCA GTTCCGGGCT GGGCGGTTTC CGTGCGGCGG ATGCCGGCAG TTACTCGCGA CACAACTTCG CCCAGTATCT GGACCTGGAA ACCAATCTGA CCGAGAAACT GGGCGTGTCG GCGGCCGTTC GCCACGAGGA CTACAGCGAT TTCGGCTCCA ATGTCAGCGG TTCACTCTCG GCGCGCTACG ATTTCACTCC GCAGGTGGCC TTGCGAGGCA GCGTATCGAC AGGCTTCCGC GCGCCTTCGC TGGCGCAGCA GAATTTTGCC TTCACGTCGT CGCAGCTGAT TGGCAACACC CTCCAGGAAG CGGGCACGTT TCCGGCCGGC AGTAACGTTG CACAACTGTT GGGCGCCGAA GACCTCAAAC CGGAAAAGTC CCGTAACTAC AGCCTTGGCC TGGTACTCCA GCCGCTGAAC AGCCTGACCT TGACTGCCGA CGTCTATCGC ATCGACATTC AGGACCGTAT CTCGCTGTCT TCCAATCTGG TGCTCAATGA CACCGCCATC AATTACCTGC GCAGCAATGG CGTAGGCGAT ATCAACTACA CCAGTGCCCG CTATTTCACC AACGCCACGG ACACCAGCAC CGATGGCGTC GATCTGGTCG CCAGTTACCG CTATCAGTTC GACAACGGCG TGCGCTGGAA CAGCACGGTG GGTTACAACT ACAACCACAC CAAAGTCACC GACGTGAAGG CCAACCCGGC GATTCTCGAT CAGTTGGGGG TGAATCTGGT ACGGGTAGAC CGCAGGGAAC GCATCGGTTT GCTGGGCGAC ACCACGCCAC AACACAAACT GACACTGGGC AATGACCTGA CGTTCGGTAA CTGGGCGTTG CACTCCAACC TGGTCCGCTA CGGCGAGTTC ACCAGCTATC AGGCCGACAA GGTCAACGAC CAGACCTTCA GCGCCGCCTG GCTGCTGGAC CTGGCGGTCG ACTACAAGCT CAAGAGCTGG GTCTTCACCC TGGGCGGCGA CAACGTCACC GACAAATACC CGGAGAAGCT CAACGACTTC TCCTCCAGCG GCGGCAACCT GGCCTACAGC ACGTTCTCAC CCTACGGGTA CAGCGGCGCT TATTACTACG GCAAGGTCAC GTATAACTGG TAG
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Protein sequence | MGNFKRSVLA TAIFSANLLS VAGISASAFA AEATDEANTQ GASTLGTVIV TGTRAQERTA SASLSPIDVI SGDSLRSSGS SELGTVLARL IPSINFPRPS LVDGAELTRP AQLRGLSPDQ VLVLVNGKRR HTSAFVNLGG AVGRGSAPAD LNAIPLSAID HIEVLRDGAS ARYGSDAIAG VINIILKSAD HGGSISSQYG QYKKGDGIQR QVSGNTGFAL GDNGTFNLSG EGANNDYTNR AGDDFRASSV GSTTYGQQVF RQGEPQTHEG KLQYNAEYSF NDAAEFYSFG GYSKRRGETA GFYRPSNASN NIAAIYPNGY LPLINGTLED ISLVAGLRGE LAYDWHYDVS ANYGKNSYEL RTKTINTSLG LNTPRSFYNG TLTNDQKQLS LDLSREFNTA WLPYPVSVAF GAEYLRQGYQ IEAGQAESYF QTGSSGLGGF RAADAGSYSR HNFAQYLDLE TNLTEKLGVS AAVRHEDYSD FGSNVSGSLS ARYDFTPQVA LRGSVSTGFR APSLAQQNFA FTSSQLIGNT LQEAGTFPAG SNVAQLLGAE DLKPEKSRNY SLGLVLQPLN SLTLTADVYR IDIQDRISLS SNLVLNDTAI NYLRSNGVGD INYTSARYFT NATDTSTDGV DLVASYRYQF DNGVRWNSTV GYNYNHTKVT DVKANPAILD QLGVNLVRVD RRERIGLLGD TTPQHKLTLG NDLTFGNWAL HSNLVRYGEF TSYQADKVND QTFSAAWLLD LAVDYKLKSW VFTLGGDNVT DKYPEKLNDF SSSGGNLAYS TFSPYGYSGA YYYGKVTYNW
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