Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2287 |
Symbol | |
ID | 3367802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2657321 |
End bp | 2658154 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637652637 |
Product | TonB, C-terminal |
Protein accession | YP_235368 |
Protein GI | 66045527 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00257812 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000380211 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCAATG TCCAGACCGC AGCCAGTGCA CATGACGTGC CCTGGCGCCA GACGCCGAGT GGCGACCTGG TCGATCTGGG GCGTCCTTTC CGTGCGCCGC TGGCGTTAGC GCGGCTGCAA AGCACCCCCA AGCCGATTCT GGGGCGGCGC GAAGCCATTT TGCTCGGTGC GCTGGCGCTG GTGTTCCATG GCGCGATCAT TTACTGGCTG AGCCAGAACC CGACGCCGGC ACTGCCGGTG GTGCCACCTG AAATTCCGCC GATGACCATC GAGTTTTCCC AGCCTGCGCC ACCGGTTGTG GAAACACCGC CGCCAACGCC CGAGCCTGTC GTGCAGCCGG TGGTCGAGCC GCCGCCTCCG GTCGAGGACG AACTGGCAGT CAAACCACCA CCGCCCAAAC CGATTCCCAA GCCCAAGCCA CAGCCGCCCA AACCGGTGTT CAAGCCAGCT GTAAAACCAG TGGCCAAACC GGTTGAGCAG CCACCCGCAC CTCCTGTACC TGCAGCCCCT GTCGCCGCGC CTGCGCCACC GGCAGCGCCC GCACCAAAGC CGGTGACCCC GGCCTCGGCC AGCGCGGGTT ACCTGCGCAA CCCGGCCCCG GAATACCCAT CGCTGGCCAT GCGTCGTGGC TGGGAAGGCA CTGTGCTGTT GCGCGTACAT GTATTGGCCA GCGGCAAACC CGGCGAGATT CAGATACAGA AGAGCAGTGG CCGCGACCAG CTCGACGACG CCGCGCTGGC GGCGGTGAAA CGCTGGAGTT TCGTTCCGGC CAAGCAGGGC GATGTCGCCC AGGATGGCTG GGTCAGCGTG CCCATTGATT TCAAGATCAA ATGA
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Protein sequence | MGNVQTAASA HDVPWRQTPS GDLVDLGRPF RAPLALARLQ STPKPILGRR EAILLGALAL VFHGAIIYWL SQNPTPALPV VPPEIPPMTI EFSQPAPPVV ETPPPTPEPV VQPVVEPPPP VEDELAVKPP PPKPIPKPKP QPPKPVFKPA VKPVAKPVEQ PPAPPVPAAP VAAPAPPAAP APKPVTPASA SAGYLRNPAP EYPSLAMRRG WEGTVLLRVH VLASGKPGEI QIQKSSGRDQ LDDAALAAVK RWSFVPAKQG DVAQDGWVSV PIDFKIK
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