Gene Psyr_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2269 
Symbol 
ID3367784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2635090 
End bp2635995 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID637652619 
Productputative GTP cyclohydrolase 
Protein accessionYP_235350 
Protein GI66045509 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.660602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.10158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC CTCTCCCGGA TGTTGCCCTG ACGGAAATTT CCCCGGCGCT GGTGTCACTC 
GACTGGGTCG GCATGCAAGG TGTGGAAGTG CCGATCAGAC TGGCCGAAGC GAGCATTCGT
CATCCTGTTC ACGCGCACGT CGATCTGCAG GTCGATCTGG CCGACCCGAG CGTCAAGGGC
ATCCATATGT CGCGACTCTA TCGGCTGCTC GACGGCTATG CCGAGCGCCA GATCGTCAGC
CCCGATACGC TGGCTGCCTT GCTGGAAGCC ATGGTCGAGA GTCACCTCGA CTGCCACTCC
AGTCACGCCC GGTTGACGCT GAGCTTCAAT CTGCTGTGCC GTCGACCGGC GTTGATTACC
GAAGGGCTCA GCGGCTGGAA ATCCTACCCC GTGAAGCTCG ATGCCACCTG GCATGCCGGT
CGGCTGTGCC TCGACAGTTC GGTGGATATC ACCTACTCGT CCACCTGCCC GTGCTCGGCC
GCACTGTCTC GCCAATTGCT GGAAGAGGCA TTTGCGGCGC GCTTCGGCAG GCAGTCGTTT
GTCGATCCGA TGCAGGTCGC GACCTGGCTG CGCGAGAACG CATCGTTCGC CACGCCGCAC
AGCCAGCGCA GCGTTGCGAC GGTGCAGGTA CGGGTGGCAG AGCAGGCGGC CGAACTGGGC
TTGATGACGC TGATCGACCT GGTAGAGCAG GCGCTGGGCA CCCCGGTGCA AACCGCCGTC
AAGCGTGCCG ACGAACAGGC CTTTGCGCGG CTCAACGGCC AGAACCTGAT GTACGTCGAA
GACGCCGCAC GCAAGGTCCA GCAAGCACTC GAAGGCCGCT ATGCAGCTTC CAGCGTCAGT
GTCCGTCACT TTGAAAGCCT GCATCCGCAC GATGCAGCCG CCCAGACTTC CAACTACCTG
TCCTGA
 
Protein sequence
MNKPLPDVAL TEISPALVSL DWVGMQGVEV PIRLAEASIR HPVHAHVDLQ VDLADPSVKG 
IHMSRLYRLL DGYAERQIVS PDTLAALLEA MVESHLDCHS SHARLTLSFN LLCRRPALIT
EGLSGWKSYP VKLDATWHAG RLCLDSSVDI TYSSTCPCSA ALSRQLLEEA FAARFGRQSF
VDPMQVATWL RENASFATPH SQRSVATVQV RVAEQAAELG LMTLIDLVEQ ALGTPVQTAV
KRADEQAFAR LNGQNLMYVE DAARKVQQAL EGRYAASSVS VRHFESLHPH DAAAQTSNYL
S