Gene Psyr_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2262 
Symbol 
ID3367777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2626882 
End bp2628309 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content65% 
IMG OID637652612 
Producthypothetical protein 
Protein accessionYP_235343 
Protein GI66045502 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC GTTCGCACGC CATCGAAAAC GTCACTGAAC AGTTCGACAA CGGCGCGTTT 
TTCGCCCTGC TCGGCAAAAG CGTTGCCTAC CCGACCCAGA GCCAGGAGGC CGAGAGCCTG
CCCGAGCTGT ATCGTTATCT TCATGAGTTC ATCACCCCGC ATGTCGAGCG TCTGGGTTTC
AGCGTTACCG TGCATGACAA CCCGGTCGCC GGGCGTGGCC CGCTGATGAT CGCCACGCGC
ATCGAAGCCG CTGAACTGCC GACGCTGCTC AGTTACGGCC ACGGCGACGT GGTTCGCGGC
TATGACGCGC AGTGGCAGAC CGGCCTGTCG CCATGGCAGG TGATCGAACG TGGCGAGCGC
TGGTACGGGC GCGGCACCGC CGACAACAAG GGCCAGCACC TGATCAACCT GACGGCACTG
GAGCAGACCC TCAAGGCTCG CGATGGCAAG CTGGGCTTCA ACGTCAAACT GCTTCTGGAA
ATGGGCGAAG AAGATGGCTC TCCCGGCCTG AGCGCGTTCT GCCAGGCGCA CGCCGAAGAG
CTCGCCGCCG ACATCTTCAT CGCCTCCGAT GGCCCGCGCC TCGCAGCGGC ACGCCCTACC
CTGTTTCTCG GCTCGCGCGG GGTGTTCAAC TTCGAGCTGA CGGTGAACCT GCGCGAAGGC
GCGCACCATT CCGGCAATTG GGGCGGCCTG CTGGCTAACC CGGGCATCAT TCTGGCCAAT
GCCATCGCCA GCATGGTCGA TGAGCATGGC CGGGTGAAAG TTGCAGGGCT GATGCCCAAA
GCCATCCCTG ACGCAGTGAA GGCCGCGTTG GCGGATATCG AGGTCGGCGG CGGCCCCGGC
GACCCGGACA TCGACGCCGA CTGGGGCAAC CCGGCGCTGT CGCTCAGCGA AAAAGTCTTC
GGCTGGAACA CCCTCGACAT CCTCGCCTTC AAGACCGGCA ACCCGGACGC CCCGGTGCAC
GCCATTCCCG GCAAGGCTCA CGCGTTGTGT CACATTCGCT TTGTGGTCGA CAGCGATTAC
AACGCCTTCA TCCCCGCGGT GCGCGCGCAC CTGGATGCCC ATGGCTTCGA TCGCGTCGAG
GTCAGGCAGA CGCGTATGGA CGTGATGCAC GCCACGCGCC TGTCGCCGGA CAGCCCGTGG
GTCGGCTGGG CGCTGGATTC GCTGGCCGCC ACCACGGGCA AGAAACCCGC ACTGCTGCCC
AATCTGGGCG GCTCGTTGCC TAATGACGTG TTCGCTGAAG TGCTGGGCCT GCCGACGGTC
TGGGTGCCAC ACTCATACCC GGCGTGCTCG CAGCATGCAC CTGACGAGCA CTTGCTGGCT
CCGGTGGTCA AGGAGAGCCT GCAAATCATG GCCGGACTGT TCTGGGACCT GGGCACGGAC
GGCGCACGAC TGACCCGGGA ACAGCGGGCA CAGGAGCTGA GTGAATGA
 
Protein sequence
MSSRSHAIEN VTEQFDNGAF FALLGKSVAY PTQSQEAESL PELYRYLHEF ITPHVERLGF 
SVTVHDNPVA GRGPLMIATR IEAAELPTLL SYGHGDVVRG YDAQWQTGLS PWQVIERGER
WYGRGTADNK GQHLINLTAL EQTLKARDGK LGFNVKLLLE MGEEDGSPGL SAFCQAHAEE
LAADIFIASD GPRLAAARPT LFLGSRGVFN FELTVNLREG AHHSGNWGGL LANPGIILAN
AIASMVDEHG RVKVAGLMPK AIPDAVKAAL ADIEVGGGPG DPDIDADWGN PALSLSEKVF
GWNTLDILAF KTGNPDAPVH AIPGKAHALC HIRFVVDSDY NAFIPAVRAH LDAHGFDRVE
VRQTRMDVMH ATRLSPDSPW VGWALDSLAA TTGKKPALLP NLGGSLPNDV FAEVLGLPTV
WVPHSYPACS QHAPDEHLLA PVVKESLQIM AGLFWDLGTD GARLTREQRA QELSE