Gene Psyr_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2256 
Symbol 
ID3367771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2620918 
End bp2621634 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID637652606 
ProductABC transporter 
Protein accessionYP_235337 
Protein GI66045496 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4778] ABC-type phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02324] phosphonate C-P lyase system protein PhnL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.012889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.72713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGT TGATCGAGGT CCGTGACCTG TCGAAAACCT TCACCCTGCA TCAGCACAAC 
GGTGTAGTCC TCAATGTACT GCGCGGCCTG AATTTCTCGG TGCGCGCCGG CGAATGCCTG
GTGCTCAGCG GGCAATCCGG CGCGGGCAAA AGCACGCTGC TGCGCACCCT GTACGGCAAT
TACCTGCCTG CCGCCGGCAG CATTCGCGTG CAGCATGAAG GCGAGTGGAC CGAACTGGTC
GGCGCAACCC CGCGCCAGGT GCTTGAGGTG CGACGCAAGA CGCTCGGCTA CGTCAGCCAG
TTCCTGCGCG TGATCCCGCG TGTGTCCAGC CTGGACGTGG TCATGGAACC GGCCCTGGCG
CGCGGCTGGT CCCGTGAGCA GGCGCAGGAG CGCGCGCAAC TGCTGCTGGG GCGGCTGAAC
ATTCCGCAGC GTTTGTGGCC GCTGGCGCCC AGTACGTTTT CCGGTGGCGA ACAGCAGCGC
ATCAACATCG CGCGCGCATT CATGGTGCCA TGGCCGGTGC TGTTGCTCGA CGAACCGACT
GCGTCGCTGG ACGACGCCAA CCGCCGGGTG GTGCTGGAGC TGGTCGACGA GGCCAAACAG
GCCGGTGCCG CGCTGATCGG TATTTTCCAT GACCGCGATG CCCGCGAGGC AGTCGCCAAT
CGTCAACTCG ACATGACCCC GGTGGACCTC ACCGCCAAGG AGTTGCTGCA ATGCTGA
 
Protein sequence
MTTLIEVRDL SKTFTLHQHN GVVLNVLRGL NFSVRAGECL VLSGQSGAGK STLLRTLYGN 
YLPAAGSIRV QHEGEWTELV GATPRQVLEV RRKTLGYVSQ FLRVIPRVSS LDVVMEPALA
RGWSREQAQE RAQLLLGRLN IPQRLWPLAP STFSGGEQQR INIARAFMVP WPVLLLDEPT
ASLDDANRRV VLELVDEAKQ AGAALIGIFH DRDAREAVAN RQLDMTPVDL TAKELLQC