Gene Psyr_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2249 
Symbol 
ID3367764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2615476 
End bp2616264 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID637652599 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_235330 
Protein GI66045489 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.859646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.75616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC ACGTTGCCTA TACCCAGGTT GCGGGCAAAC CCAACAGGTC CCGTTATCTG 
GGCTGGGGCC TGTTGCTCGC TGCACTGGCC TGGGCCTGGC ACGGCGCAGA AATGAACCCG
ATGGCACTGG TTCGCGACTC GTCGAACATG GCCACATTCG CCGCCGATTT CTTTCCGCCG
GACTTCCGTG AGTGGCGCAG TTACCTCAAG GAAATGCTGG TGACTATCCA GATCGCCCTG
TGGGGCACGG CGCTGGCGAT TGTCTGCTCG ATACCGCTGG GCATTCTGTG CGCCGAGAAC
ATCACGCCGT GGTGGATTCA CCTGCCGCTG CGGCGCTGCA TGGACGCTTT TCGTTCGATC
AACGAGATGG TCTTCGCGAT GCTGTTCGTG GTTGCCGTCG GGCTGGGGCC GTTCGCCGGG
GTGCTGGCGC TGTGGATCAG CACCACCGGG GTCCTCGCCA AACTGTTCGC CGAAGCTGTC
GAAGCCATCG AGCCCGGACC GGTCGAAGGG GTGCGCGCCA CCGGTGCCAG CGCCTTGCAG
GAAGTCATCT ACGGGGTCAT TCCGCAGGTC ATGCCGCTGT GGATCTCCTA TGCTCTATAC
CGGTTCGAAT CCAATGTGCG CTCGGCAACC GTGGTAGGAA TGGTCGGCGC AGGCGGCATC
GGGGTTATTC TCTGGGAAAA CATTCGCGCC TTTGCGTTCG TCCAGACCAG CGCCGTGCTG
CTGGTGATCA TCGTTGTGGT AAGCGTCATC GACATCATGT CGCAGCGCCT GCGCAAGCAA
TTCATCTGA
 
Protein sequence
MTTHVAYTQV AGKPNRSRYL GWGLLLAALA WAWHGAEMNP MALVRDSSNM ATFAADFFPP 
DFREWRSYLK EMLVTIQIAL WGTALAIVCS IPLGILCAEN ITPWWIHLPL RRCMDAFRSI
NEMVFAMLFV VAVGLGPFAG VLALWISTTG VLAKLFAEAV EAIEPGPVEG VRATGASALQ
EVIYGVIPQV MPLWISYALY RFESNVRSAT VVGMVGAGGI GVILWENIRA FAFVQTSAVL
LVIIVVVSVI DIMSQRLRKQ FI