Gene Psyr_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2245 
Symbol 
ID3367760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2610281 
End bp2611150 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID637652595 
Producthypothetical protein 
Protein accessionYP_235326 
Protein GI66045485 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0596147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.358585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAA TCATCCCCCG CCCTGCACAG GATGGCCTCG CCATGCCAAG TATCGAGCAA 
CTTTTTGACG GTTTGCACAG CCTCCCGAGT ATTCCCAAAG TGGCTCAGGA CTTGATGCTG
CAATTTGACA ATCCCTCTTC GAACCTGGAA AGCATCGCCC GCAACATCGA GAAGGACCCG
GTGATTGCCG CCAAGGTACT GCGCCTGGCC AACTCGGCAC GCTTTCGCGG CTCGAGGGAA
TCCTCAAGTA TCGAAGACGC GGCCATGCGC CTGGGTTTCA ATACGCTGCG TACGCTGGTC
ATGGCCTCGG CAGTGACCGG TGCATTCAAG GCCGGGCCGA GTTTTGATCT CAAGGGGTTC
TGGCTCAAAA GCTTTCAGGT GGCAGGAATC TGCCGGATGC TGGCGAAACA GACCGGCGTC
GACCCTGAAA TCGCCTTTAC CTGCGGGGTC ATGCATAACA TCGGTGAGTT ACTGATCCAG
ACTGGCGCAC CCGATGTTGC CGAGCGTCTG AACAACGCCG CCAAAGCCGG AACGCCAGGG
CGTGCGGCCA GCGAAACCCT GCAACTGGGT TTCAGCTACC CGGAGGTCGG TGCAGAACTG
GCCAGTCGCT GGCATCTGCC CAAGGTCATT CAACAGGCTA TCGCCTATCA GGCAACGCCG
ATGAAGGCAC CGGCTGACGC ATCGCTGCCG AGGATCGTCG CCCAGGCCAT CACCATTTCG
GATGCCCTGG AAGCTCACGG CGGCGCGACA CCTCAGGCGC AGCAGGCGTC AGGCGGGCCG
CTGATGGAAG GCATCGATCT GGACGCGCTG TTTGCCGGGC TGCCGGCGGT GCTGGAAGCC
GACAAGGCAT TTTCCGAATT GTTGAGCTGA
 
Protein sequence
MVEIIPRPAQ DGLAMPSIEQ LFDGLHSLPS IPKVAQDLML QFDNPSSNLE SIARNIEKDP 
VIAAKVLRLA NSARFRGSRE SSSIEDAAMR LGFNTLRTLV MASAVTGAFK AGPSFDLKGF
WLKSFQVAGI CRMLAKQTGV DPEIAFTCGV MHNIGELLIQ TGAPDVAERL NNAAKAGTPG
RAASETLQLG FSYPEVGAEL ASRWHLPKVI QQAIAYQATP MKAPADASLP RIVAQAITIS
DALEAHGGAT PQAQQASGGP LMEGIDLDAL FAGLPAVLEA DKAFSELLS