Gene Psyr_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2243 
Symbol 
ID3367758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2607675 
End bp2608076 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content61% 
IMG OID637652593 
Productendoribonuclease L-PSP 
Protein accessionYP_235324 
Protein GI66045483 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0340055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.738616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACC GAGAGCTCAT CATCCCGCCC ACCATGCAGT CGATCATGGA CCGTGCAGGC 
TATGCGCCTG CGGTCAGGGT TGGCGATACC CTGTACTGCG CGGGCCAGGT GGGACGTACA
CGGGATATGG AGGTCATTCT CAACCCCGAG GCGCAATTCA TCGCCTGCTG GGAGAATCTG
CGCACGGTAC TCGCCGAGGG CGGCTGCACC TTCGACGATA TCGTCGACAT GACCACTTAT
CACGTCGCCA TGAGCGAACA CATGGCGGTG TTTCGCGAGG TGAAAAACCG CATCTTCCCG
CGTGGCCAGT GCGCCTGGAC CTGCATCGGC GTGGCTGAGC TGGCACATCC AGGGCTGCTT
CTGGAGATCA AGTGCATTGC GGTCAGGCGC AACAACGCCT GA
 
Protein sequence
MSDRELIIPP TMQSIMDRAG YAPAVRVGDT LYCAGQVGRT RDMEVILNPE AQFIACWENL 
RTVLAEGGCT FDDIVDMTTY HVAMSEHMAV FREVKNRIFP RGQCAWTCIG VAELAHPGLL
LEIKCIAVRR NNA