Gene Psyr_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2239 
Symbol 
ID3367754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2602454 
End bp2603398 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content60% 
IMG OID637652589 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_235320 
Protein GI66045479 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.838168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGACA AGAAGTTCGC CATCGATCTC GCCTACCGTC CCCGCCTTGC CGACCTCAAA 
CCGCTGACGT CGACGACCCC ATTGCTCGAA CCACAGGCGC TTGCCGCAGG ACGCACCACA
CCAGCAAGCG ACTTGAAAAA ACGCACCGGC TATGCAGAGA ACTTCCTCGG CGATTTCATC
GTGCCCTGGC CGACTGCCGA CGAGGAGCTT GCGCCTGACG TCTATCCTTT GAAGAACGCC
GGCGATCGCC TCGATTACAC GCACTTTTCC ATCACCATGT CGCGCAGTCG GCGTCTGGCG
CTGTATGTCG GCGTCAACAT TGACGGTGCC AACAGTGTAG AGGTCAAGCG CAGCAAAGAT
TCCTGGGCAT TTGACGGCCG TCTGCCCGCC GAGGCGCAGA TTGGCGAGAG CGTGTATGCC
GACAACCTGC TGGATCGCGG CCATCTGGTT CGGCGTCAGG ACCCTAACTG GGGCAAGGAA
GCCGAAGTTG CCAACAGCGA CACCTTCCAC TTCACCAACT GCTCGCCGCA GATGGGCGCG
TTCAACCAGA AGACCTGGCT GGAACTCGAG GACTACATTC TCGACAACAC ACGACGCTGG
AAATCACGGG TAACGGTGTT CACCGGCCCG GTGCTGCGCG ACGACGACCG CAGCTACCGC
AACGTCAAAA TCCCTTCTGC ATTCTGGAAG GTCGTAGCCT TTCTCGGTGA TGACGGCAAG
CCTTCGGCCA GCGCCTACAT GATCGACCAG ACCCGCGAGC TGGGTAAGCT GGACATCATG
TTCGGCCCAC TCAAAACCTG GCAACGCAGC GTCGCGCAGA TCGAACAACT CACCGGCATC
CGCTTTGGCG ACCTGTCCAG CTACGACGGC TTCTCCAACG AAGAACGCCT GACCGGCACA
CGCATCGAAG CCCAGATCCG CGGACCGCAG GATATTCGAG TCTGA
 
Protein sequence
MPDKKFAIDL AYRPRLADLK PLTSTTPLLE PQALAAGRTT PASDLKKRTG YAENFLGDFI 
VPWPTADEEL APDVYPLKNA GDRLDYTHFS ITMSRSRRLA LYVGVNIDGA NSVEVKRSKD
SWAFDGRLPA EAQIGESVYA DNLLDRGHLV RRQDPNWGKE AEVANSDTFH FTNCSPQMGA
FNQKTWLELE DYILDNTRRW KSRVTVFTGP VLRDDDRSYR NVKIPSAFWK VVAFLGDDGK
PSASAYMIDQ TRELGKLDIM FGPLKTWQRS VAQIEQLTGI RFGDLSSYDG FSNEERLTGT
RIEAQIRGPQ DIRV