Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2239 |
Symbol | |
ID | 3367754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2602454 |
End bp | 2603398 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652589 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | YP_235320 |
Protein GI | 66045479 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.838168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGACA AGAAGTTCGC CATCGATCTC GCCTACCGTC CCCGCCTTGC CGACCTCAAA CCGCTGACGT CGACGACCCC ATTGCTCGAA CCACAGGCGC TTGCCGCAGG ACGCACCACA CCAGCAAGCG ACTTGAAAAA ACGCACCGGC TATGCAGAGA ACTTCCTCGG CGATTTCATC GTGCCCTGGC CGACTGCCGA CGAGGAGCTT GCGCCTGACG TCTATCCTTT GAAGAACGCC GGCGATCGCC TCGATTACAC GCACTTTTCC ATCACCATGT CGCGCAGTCG GCGTCTGGCG CTGTATGTCG GCGTCAACAT TGACGGTGCC AACAGTGTAG AGGTCAAGCG CAGCAAAGAT TCCTGGGCAT TTGACGGCCG TCTGCCCGCC GAGGCGCAGA TTGGCGAGAG CGTGTATGCC GACAACCTGC TGGATCGCGG CCATCTGGTT CGGCGTCAGG ACCCTAACTG GGGCAAGGAA GCCGAAGTTG CCAACAGCGA CACCTTCCAC TTCACCAACT GCTCGCCGCA GATGGGCGCG TTCAACCAGA AGACCTGGCT GGAACTCGAG GACTACATTC TCGACAACAC ACGACGCTGG AAATCACGGG TAACGGTGTT CACCGGCCCG GTGCTGCGCG ACGACGACCG CAGCTACCGC AACGTCAAAA TCCCTTCTGC ATTCTGGAAG GTCGTAGCCT TTCTCGGTGA TGACGGCAAG CCTTCGGCCA GCGCCTACAT GATCGACCAG ACCCGCGAGC TGGGTAAGCT GGACATCATG TTCGGCCCAC TCAAAACCTG GCAACGCAGC GTCGCGCAGA TCGAACAACT CACCGGCATC CGCTTTGGCG ACCTGTCCAG CTACGACGGC TTCTCCAACG AAGAACGCCT GACCGGCACA CGCATCGAAG CCCAGATCCG CGGACCGCAG GATATTCGAG TCTGA
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Protein sequence | MPDKKFAIDL AYRPRLADLK PLTSTTPLLE PQALAAGRTT PASDLKKRTG YAENFLGDFI VPWPTADEEL APDVYPLKNA GDRLDYTHFS ITMSRSRRLA LYVGVNIDGA NSVEVKRSKD SWAFDGRLPA EAQIGESVYA DNLLDRGHLV RRQDPNWGKE AEVANSDTFH FTNCSPQMGA FNQKTWLELE DYILDNTRRW KSRVTVFTGP VLRDDDRSYR NVKIPSAFWK VVAFLGDDGK PSASAYMIDQ TRELGKLDIM FGPLKTWQRS VAQIEQLTGI RFGDLSSYDG FSNEERLTGT RIEAQIRGPQ DIRV
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