Gene Psyr_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2225 
Symbol 
ID3367740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2586853 
End bp2587755 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID637652575 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_235306 
Protein GI66045465 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0740597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.676073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC ACATCATCGA CGGCAAGGCC GCCGCCGCTC GCGTTCTGCA GCAGGTCAGA 
CACGACGTGA ACATCTTGAA GGCCGAAGGC ATCGAACCGG CGCTGGCGGT CATTCTGGTC
GGTAATGACG CGGCCAGTGA GGTCTACGTA CGCAACAAGA TCCTGCGCGC CGGGGAAGCC
GGCATTCGCT CGCTGGAGCA CCGCCTGCCG GCCGACAGCA GCCAGGCACG CTTACTGGCG
TTGATTGCCG AATTGAACGC CGACAACACG GTAAACGGCA TTCTCCTGCA ACTGCCCTTG
CCCGCTCACA TCGATGAAAA CCGCGTCCTG CAGGCTATCG ACCCGGACAA GGACGTTGAC
GGTTTTCACA GTGAAAACGT CGGTGGCCTG AGCCAGGGGC GCAACGTACT GACGCCCTGC
ACCCCCAGCG GTTGCCTGCA CTTGCTGGAA GAAACCTGCG GCGATCTGAG CGGCAAGCAT
GCGGTGGTGA TCGGTCGCTC CAACATCGTC GGCAAACCCA TGGCGGCTCT GCTGCTGCAA
GCGCATTGCT CGGTGACGGT GGTGCATTCG CGCAGTACCG ACGCCAGGGC CTTGTGCCAG
TTGGCCGACA TCGTCGTGGC GGCGGTTGGC CGTCCGCGCC TTATCGATGC CAGCTGGCTC
AAGCGCGGCG CGGTGGTGAT CGACGTCGGC ATCAACCGCA TCGAGGACCA TGGCCGCAGC
CGCCTGGTGG GCGATGTCGA TTTCGCCAGC GCCACCGAAG TCGCTTCTGC CATCACGCCC
GTTCCCGGCG GAGTCGGCCC GATGACTATC GCCTTTCTGA TGAAAAACAC CGTGACTGCT
GCCCGGCAGC AGGCCCACGC GCAACGCAGC CAACCGGAGG CCGTATGCCT TTCAACCTAT
TGA
 
Protein sequence
MSAHIIDGKA AAARVLQQVR HDVNILKAEG IEPALAVILV GNDAASEVYV RNKILRAGEA 
GIRSLEHRLP ADSSQARLLA LIAELNADNT VNGILLQLPL PAHIDENRVL QAIDPDKDVD
GFHSENVGGL SQGRNVLTPC TPSGCLHLLE ETCGDLSGKH AVVIGRSNIV GKPMAALLLQ
AHCSVTVVHS RSTDARALCQ LADIVVAAVG RPRLIDASWL KRGAVVIDVG INRIEDHGRS
RLVGDVDFAS ATEVASAITP VPGGVGPMTI AFLMKNTVTA ARQQAHAQRS QPEAVCLSTY