Gene Psyr_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2218 
Symbol 
ID3367733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2577712 
End bp2578587 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID637652568 
ProductBeta-lactamase-like 
Protein accessionYP_235299 
Protein GI66045458 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTA AATCCATGCT TGCCCTGTCC TTCGCTGCTC TGTTCCCTCT CGCAGCCCAG 
GCCGCCGCCC CCTTGGCCAT CGAGGTGTAC AACCCGGCTG AAAAAGCCGT CTTCCCGGTG
TCATCCGAAC TGATCATCGG CAAGCATGAC GCGGTGCTCA TCGATGCGCA GTTCCAGCGC
AACGACGCCG AGGCCCTGGT GCAAAAGATC AAGGCCAGCG GCAAGCAACT CACCACGGTC
TACATCAGCC ACAGTGACCC GGACTACTAC TTCGGTCTGG ACGTCATCAA AGCCGCGTTC
CCCGAAGCGA AGATCGTCGC CAGCACGCCT ACCGTGAAGG CGATCAAGGC GTCGATGCAG
GGCAAACTCG CCTACTGGGG CCCGATTCTC AAGGACAATG CGCCAGCCAG CCTGGTTGTG
CCGGAAGTAC TCAAGGGCGA CCACCTGACG CTTGAAGGCC AACCGTTGCA GATCAAAGGC
CTGAACGGCC CGGCCCCCGA GCGCAGCTAC GTATGGATTC CCTCCCTCAA GGCGGTAGTC
GGTGGTGTCG TGGTCTCCAG CGGCATCCAT GTCTGGATCG CTGACACGCA AAGCACGAAA
TCGCGTCAGG ACTGGCTCGC GACACTCAAG GGCATCGAGG CGCTGAAACC GGCCACCGTG
ATTCCGGGTC ATTATCTGGG CGAGATCCCG TCAGGCACCC AGGCCGTGAC GTTCACCGCC
GACTACCTGA AGTCCTTCGA AGAACAGGCC ACCAAGGCCA AGGATTCCGC CGCCCTGATC
GACGCCATGC AGAAAGCCTG GCCGCAACTG GCCGAGCCGG CTTCGCTGGA GATGAGCGCA
AAAGTCATCA AGGGCGAGAT GAAGTGGCCG AATTGA
 
Protein sequence
MSRKSMLALS FAALFPLAAQ AAAPLAIEVY NPAEKAVFPV SSELIIGKHD AVLIDAQFQR 
NDAEALVQKI KASGKQLTTV YISHSDPDYY FGLDVIKAAF PEAKIVASTP TVKAIKASMQ
GKLAYWGPIL KDNAPASLVV PEVLKGDHLT LEGQPLQIKG LNGPAPERSY VWIPSLKAVV
GGVVVSSGIH VWIADTQSTK SRQDWLATLK GIEALKPATV IPGHYLGEIP SGTQAVTFTA
DYLKSFEEQA TKAKDSAALI DAMQKAWPQL AEPASLEMSA KVIKGEMKWP N