Gene Psyr_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2209 
Symbol 
ID3367724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2567177 
End bp2568151 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content60% 
IMG OID637652559 
ProductABC transporter, substrate-binding protein, aliphatic sulphonates 
Protein accessionYP_235290 
Protein GI66045449 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.563357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC CGATAAAACA CACACAAACC GACTATCGCC GTGCGCTGCT GGCAGGTCTG 
CTCGCGGGGT TGGCCCTGTG CATCACCCTT CCCGCCGAAG CACAGGAAAC GCTGCGAATC
GGTTACCAGA AGTCGTCGAC GCTGATCACG CTGCTGAAAA CACAGGGCAC TCTGGAAAAA
GCCCTCGCCG CACAGCACGT TGCGGTGACC TGGCATGAGT TTCCGAGTGG CCTGCCACTG
CTGGAGGCCT TGAATGTCGG CAACGTGGAC ATCAGCGCGG ATGTGGCGGA CACCGTACAG
ATCTTCGCTC AGGCGGCACA GGCCCGGCTG ACCTACTTTG CCCAGGAAGC GGCCTCGCCT
TCCGCGCAGG CAATCATCGT CCACAAAAAC TCGCCCGTGC GGCAGCTATG GGATCTGAAA
GGCAAAAAGG TCGCGGTCAC CAAGGCGGCG GGTTCTCACT ACCTGCTGAT CGCGGCATTG
AAAAAGGCCG GTCTGGCATT TTCCGATATT CAGCCCGCCT ATCTGTCGCC CGCCGACGGC
CGTGCAGCCT TCGAGAACAA CAAGGTTGAC GCCTGGGTCA CCTGGGAACC CTTCCTGACC
AGCGCCCAAC GGCAATTGCC AACGCGCACT CTGGCTGACG GCAAAGGGCT GGCCAGCTAC
AAGCGCTATT ACCTGACCGG CACCGGCTAT GCCAAGGAAC ACCCACAAGT GCTCAGCGTG
GTTTACGAGC AGTTGCACAA GGCAGGCATC TGGCTCAAGG CCAATCCCCG CGACGCCGCA
AAGGTGCTGA GTCCTTTGTG GGGCAATCTG GATATCGAAA CGGTTGAAAT CGCCAACAGC
AACCGGGCTT ATCAGATCCA GCCAGTCACG CACGATCAAC TGGACGAACA ACAGCATATC
GCCGACGCCT TCTTCGCTGC CGGGCTGCTG CCCAAGGCGG TGGATGCGCA GGATGTGGAG
GTCTGGAAGC CTTGA
 
Protein sequence
MPKPIKHTQT DYRRALLAGL LAGLALCITL PAEAQETLRI GYQKSSTLIT LLKTQGTLEK 
ALAAQHVAVT WHEFPSGLPL LEALNVGNVD ISADVADTVQ IFAQAAQARL TYFAQEAASP
SAQAIIVHKN SPVRQLWDLK GKKVAVTKAA GSHYLLIAAL KKAGLAFSDI QPAYLSPADG
RAAFENNKVD AWVTWEPFLT SAQRQLPTRT LADGKGLASY KRYYLTGTGY AKEHPQVLSV
VYEQLHKAGI WLKANPRDAA KVLSPLWGNL DIETVEIANS NRAYQIQPVT HDQLDEQQHI
ADAFFAAGLL PKAVDAQDVE VWKP