Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2206 |
Symbol | |
ID | 3367721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2563580 |
End bp | 2564728 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652556 |
Product | regulatory protein, putative |
Protein accession | YP_235287 |
Protein GI | 66045446 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.137264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC CGTCGATCCG TATAGGAGGT CTGTTTTCCA ATACCGGCGT CACCGCTGCC GGTGAGTGTT CAACAATGCG CGGCGCACAG TTTGCAATTC ATCAGATCAA TGCCGCCGGG GGCGTGAATG GCCGTTCTCT GGAACTGATC ACCCGCAATC CGGATTCCAC GCCTGCGCTG TTTGCCATGC ATGTCGAATC GCTGATTCGC GAAGAGAACC TGCGGTTTTT CTTCGGTTGC TACACCTCGG CGGCACGCAA GGCCGTATTG CCTGTCGTCG AACGTTACAA CGCTTTGCTG CTTTATCCGG TGTACTACGA GGGCTTCGAG TATTCGCGCA ACATCATCTA CACCGGCGCC ACGCCGAACC ACAACGCGGT GCCACTGGGC AGCTACATGT TCGATCACTT CGGCAGTCGC GTGCTGATGA TCGGCTCGGA GTACGTCTAT CCCTACGAAA CCAACCGGTT GATGAGCGAC CTGCTTTACG AGCGGGGTGG CAGCAAGCTG GGTGAATACT ACTTGCCACT GAAAAACGCC AGGGCAGAGG ACTTCGCCAG GCTCATGGTC AAGGCCAGAG AGCTGAAACC CTCGTTCATC TTTTCGACAG TGGTCGGCGA CACCATGGCG CACCTGTATC AGGCCTACGC CGATGCCGGT TTCGACCCAG CGGTCATGCC GATCGCCAGT GTTACCACCA GCGAAACCGA TATTCAGCAG ATGGGCGTCC ATCTGGGCAC CGGGCACATT TCGGCCGCGA CCTATTTCCA GTCGATCGAC ACGCCGCTCA ATCGCCAGTG CATCGCCCGG TACCGGGAAA TGTTTGGCCA GCATCAGGTG ACCGACCGCT GCTGGGAGGC CGCTTACTTT CAGGTCCATC TGCTGGCCAA GGCGATCGCC CGCGCAGGCA GTACCGACGT GGAGAGTGTT TTGCAGACCA TGCGCGGTCT GGAATACGAC GCGCCGCAGG GACGGGTGCG TATCGATGAA CACAACCACC ATACCTACCT GTACTCGCGG ATCGGCCGTG CCAATGCCGA TGGGCAGTTC GACATCCTTT ACGAGAGTCA GAAAGCGCTG AAGCCCGACC CTTATGCGGT GGCGCCTGAC TTCAATGGCT GGTCCAGCCT GACCGGGAGG CGTCCATGA
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Protein sequence | MTDPSIRIGG LFSNTGVTAA GECSTMRGAQ FAIHQINAAG GVNGRSLELI TRNPDSTPAL FAMHVESLIR EENLRFFFGC YTSAARKAVL PVVERYNALL LYPVYYEGFE YSRNIIYTGA TPNHNAVPLG SYMFDHFGSR VLMIGSEYVY PYETNRLMSD LLYERGGSKL GEYYLPLKNA RAEDFARLMV KARELKPSFI FSTVVGDTMA HLYQAYADAG FDPAVMPIAS VTTSETDIQQ MGVHLGTGHI SAATYFQSID TPLNRQCIAR YREMFGQHQV TDRCWEAAYF QVHLLAKAIA RAGSTDVESV LQTMRGLEYD APQGRVRIDE HNHHTYLYSR IGRANADGQF DILYESQKAL KPDPYAVAPD FNGWSSLTGR RP
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