| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2203 |
|---|
| Symbol | |
|---|
| ID | 3367718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2559557 |
|---|
| End bp | 2560699 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637652553 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_235284 |
|---|
| Protein GI | 66045443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.148404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA TGACTGAAAA GCCGACGCTG CGGCCGCAGG CCTCGGTGTC CGGCGCCGGC
AAGCCAGCGG GTGGCTGGTT GACGCTGATC GAGCGCTACA GCCTGATCTG GCTGTCGCTG
CTGTTGCTGG TGGCATTGCC GCTGATACTG GGGGATTTCC GCCTCGGTCT GGCCGGCAAA
TACCTGAGCC TGGCGTTCTG CGCAGTGGGC ATGGTGATGA TCTGGGGCTA CGGCGGCATC
CTCAGCCTCG GCCAGGGGAT CTTCTTCGGC CTGGGCAGTT ACATGATGGC GATGTACCTC
AAACTCGAAG CCACCGCCAC GGACGAAGCG GCCAGCGCCC TCGCCGCGTT CTACGGTTCG
GCACTGCCGG ACTTCATGAT CTGGAACAGC GTCGAAGCCC TGCCCTTGTG GTGGAAGCCG
TTCGAGTCGG CGACCTTTAC CCTGGCCGCG ATCCTGATCC TGCCTGCACT GCTGGCGTTT
CTGTTCAGTT ATGCCTACTT CAAAAAACGC GTGGGCGGCG TGTACTTCTC GATCATTACC
CTGTCACTGG CCTCGATCAT GTCGATCATG ATCATCGGCC AACAGGGCTA CACCGGCGGC
GTCAATGGCC TGACCGATTT CAAGACGGCC TTCGGCCTGA GCCTGCAGAC GCCCCAGACA
CCCTGGATTC TCTACCTGAT CACCACACTG TTGCTGCTGG CCAGCGTCGC GATGTGCGGC
TTCATCTTGC GCAGCCGCCT GGGCAAGGTG ATCGTGGCGA TCCGTGATCG CGAAGACCGG
GTGCGTTTCT CGGGCTACAA CACTGCGCTG TTCAAGGCCT TCATTTTTGC CGTGGCCGCG
CTGATTTCCG CGCTGGGCGG GGTGATGTTC ACCTTGCAGG TCGGCCTGGC GTCGCCCTCG
CTGGTGGGCA TCATTCCGTC CACCGAAATC GTCATCTATG CCGCACTGGG TGGGCGCCTG
TCGCTGGTGG GTGCGGTGTA CGGCACGCTG TTGATCGGTA CGGCAAAAAC CTGGCTGTCA
GAAAACTTCG TCAGTTTCTG GCAGTACTTC ATCGGTTTCC TGTTCATGGC CGTGGTGCTG
TTCCTGCCCA CCGGGCTGGC CGGGCTGCTG CAGCGCCTGA GCAACAAGGA GACGCAGTCA
TGA
|
|---|
| Protein sequence | MNDMTEKPTL RPQASVSGAG KPAGGWLTLI ERYSLIWLSL LLLVALPLIL GDFRLGLAGK
YLSLAFCAVG MVMIWGYGGI LSLGQGIFFG LGSYMMAMYL KLEATATDEA ASALAAFYGS
ALPDFMIWNS VEALPLWWKP FESATFTLAA ILILPALLAF LFSYAYFKKR VGGVYFSIIT
LSLASIMSIM IIGQQGYTGG VNGLTDFKTA FGLSLQTPQT PWILYLITTL LLLASVAMCG
FILRSRLGKV IVAIRDREDR VRFSGYNTAL FKAFIFAVAA LISALGGVMF TLQVGLASPS
LVGIIPSTEI VIYAALGGRL SLVGAVYGTL LIGTAKTWLS ENFVSFWQYF IGFLFMAVVL
FLPTGLAGLL QRLSNKETQS
|
|---|
| |