Gene Psyr_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2194 
Symbol 
ID3367709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2549606 
End bp2552725 
Gene Length3120 bp 
Protein Length1039 aa 
Translation table11 
GC content59% 
IMG OID637652544 
Productacriflavin resistance protein 
Protein accessionYP_235275 
Protein GI66045434 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.18457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGG GACGCTTCAA CCTTTCTGCA CTGGCCGTTC GCGAACGCGC CATCACGCTG 
TTTCTGATTA TTTTGATCGG CGTGGCCGGT ACGCTTTCAT TTTTCAAACT GGGGCGTGCG
GAAGATCCGC CTTTCACCGT CAAGCAAATG ACCGTTATTT CTGCGTGGCC TGGCGCAACC
GCTCAGGAGA TGCAGGATCA GGTCGCCGAG CCGCTTGAAA AACGTATGCA GGAATTGAAG
TGGTACGACC GTAGCGAGAC CTACACCCGG CCAGGTCTGG CATTCACTAT GGTTTCATTC
CAAGACAAGA CGCCACCTTC TCAGGTGCAG GAAGAGTTTT ATCAGGCGCG CAAGAAACTC
AGTGATGCCG CGAAGTCATT GCCCGCAGGG GTCATTGGTC CGATGGTCAA TGATGAATTC
TCGGATGTGA CCTTTGCGCT GTTTGCGTTG AAAGCCAAAG GTGAGCCGCA GCGACTGCTG
GTACGCGATG CCGAGTCACT GCGCCAGCGT CTGCTGCATG TGCCGGGCGT GAAGAAGATC
AATATCATCG GCGAGCAAGC CGAACGAATT TTCGTGTCGT TCTCCCATGA GCGGCTGGCA
ACGTTGGGTA TCGCTCCTCA GGACATTTTT TCGGCGCTCA ACGACCAGAA CGTCCTGACG
CCTGCCGGTT CGATTGAAAC CAGCGGACCG CAGGTGTTTC TGCGTCTTGA CGGTGCCTTC
GACACGCTTG AGAACATCCG CAACACGCCG ATTGTGGCGC GGGGTAAAAC GCTGAAGCTT
CAGGATGTGG CGACAGTGGA GCGCGGCTAT GAAGACCCCG CGACCTTTCT GGTCCGCAAT
CAGGGTGAGC CGGCCCTGTT GCTGGGCATC GTGATGCGCG ACGGTTGGAA CGGTCTGGAC
CTGGGCAAGG CGCTGGACGC AGAAACGGTC AGAATCAACC AAGGCATGCC ATTGGGAGTG
ACGCTTTCCA AGGTCACTGA CCAGTCGGTG AACATCGGTT CGGCCGTTGA CGAGTTCATG
ATCAAATTCT TCGTCGCCTT GCTTGTGGTG ATGCTGGTGT GCTTTCTCAG CATGGGCTGG
CGAGTCGGCG TGGTGGTCGC TGCAGCCGTA CCGCTGACGC TGGCCATGGT CTTCGTCGTG
ATGGAAGCGA CGGGCAAGAA CTTCGATCGT ATTACCTTGG GATCACTGAT CCTGGCGCTG
GGCCTGTTGG TGGACGACGC AATCATTGCC ATCGAAATGA TGGTGGTGAA GATGGAGGAG
GGCTACGACC GGATCAAGGC GTCAGCCTAT GCCTGGAGCC ACACAGCGGC GCCCATGCTT
GCCGGTACCC TGGTGACCGC TGTCGGCTTC ATGCCCAATG GCTTTGCGCA GTCGACTGCC
GGCGAGTACA CCAGCAACAT GTTCTGGATT GTCGGCATCG CTCTGATTGC TTCCTGGATA
GTTGCAGTGG TCTTCACACC TTATCTGGGG GTGAAGATGC TGCCGGAAAT CAAGCCGGTT
GAAGGCGGAC ACGCCGCCAT CTACGACACG GCGCATTACA ATCGTTTCAG ACGGGCTCTG
GCCCATGTCA TTGCCAGGAA GTGGTGGGTG GCGGGTGCGG TGATCGCTGC ATTTGTGGTG
GCGATTCTCG GAATGGGGGC AGTCAAGAAA CAATTCTTCC CGACCTCCGA TCGCCCGGAA
GTACTGATCG AAGTGCAGAT GCCCTATGGC ACGTCCATCG AGCAGACCAG CGCCACTACC
GCCAAGGTCG AGGCGTGGCT GCACCAGCAG GATGCCGCGA AGATCGTCAC GTCCTACATC
GGCCAGGGCT CGCCACGGTT TTATCTGGCA ATGGCGCCGG AGCTGCCCGA CCCGTCGTTT
GCAAAGATCG TTGTACTGAC TGAAAGCCAG GAAGCACGTG AGGCGCTCAA GCTGCGGATT
CGTCAGGCGG TTGCTGACGG GCTTGCACCT GAAGCCCGGG TCCGGGTCAC ACAGCTCGTG
TTCGGTCCTT ACTCACCGTT TCCCGTGGCG TATCGCGTGA GCGGGCCAGC CCCTGACACA
TTGCGCGAGA TCGCCACGCG GGTCGAAACC GTGATGGCGG CGAGTCCGAT GATGCGTACC
GTCAACAGCG ATTGGGGAAC ACGGGTGCCC GCGCTGCATT TCTCTCTGGA TCAGGACCGT
TTGCAGGCCG TCGGGCTGAC CTCGAGCGCA GTTGCCCGGC AATTGCAGTT CCTGCTCTCA
GGTATCCCTG TCACGTCTGT CCGCGAAGAT ATCCGTTCAG TGGACGTGAT GGGCAGGGCG
GCAGGTGACA TCCGCCTGGA CCCTGCGAAG ATCGAGGGTT TTACGCTGGT GGGGGCTGCC
GGTCAGCGTA TTCCTTTGTC GCAGGCCGGA GTGGTCGAAG TGCGCATGGA AGACCCGATT
CTGCGCCGTA GAGATCGTGT GCCGACCATC ACCGTGCGCG GTGATATTGC GCAAGATCTG
CAACCGCCGG ATGTCTCCGC CGGGATCATG AAAGCACTGC AGCCGATCAT CGACAGTCTT
CCGCAGGGCT ATCGGATCGA GCAGGCCGGA TCGATAGAGG AGTCGGCAAA GGCCACTGTG
GCATTGGCGC CGCTGTTTCC GATCATGATT GCCGTCACCT TGCTGATCAT CATCCTTCAA
GTGCGTTCGA TGTCGGCGAT GATGATGGTG TTTTTCACCG CGCCGCTCGG GTTGATCGGT
GTTGTACCGA CACTGCTTCT GTTCAATCAG CCGTTCGGTA TCAACGCCCT GGTCGGGCTG
ATCGCGCTGT CCGGCATTCT GATGCGCAAT ACCTTGATCC TGATCGGGCA AATCGACCAT
AACGAAAAGC AAGGGCTCGA CCCGTTTCAT GCGGTGGTTG AAGCGACCGT ACAGCGCGCA
CGCCCGGTGC TGCTCACGGC ACTGGCGGCG ATCCTGGCGT TCATTCCTCT GACCCATTCG
GTGTTCTGGG GCACGCTTGC CTACACGCTG ATCGGAGGCA CTCTCGGCGG GACTGTCATG
ACGCTGGTCT TCCTGCCAGC GATGTATTCG ATCTGGTTCA AAATCCGTCC GGACAGAGGA
TCGCTACCCC GAAATTCCAG CAGTCATGCC TCAACTGGCA CAGAGATGAA GGGGATCTGA
 
Protein sequence
MNPGRFNLSA LAVRERAITL FLIILIGVAG TLSFFKLGRA EDPPFTVKQM TVISAWPGAT 
AQEMQDQVAE PLEKRMQELK WYDRSETYTR PGLAFTMVSF QDKTPPSQVQ EEFYQARKKL
SDAAKSLPAG VIGPMVNDEF SDVTFALFAL KAKGEPQRLL VRDAESLRQR LLHVPGVKKI
NIIGEQAERI FVSFSHERLA TLGIAPQDIF SALNDQNVLT PAGSIETSGP QVFLRLDGAF
DTLENIRNTP IVARGKTLKL QDVATVERGY EDPATFLVRN QGEPALLLGI VMRDGWNGLD
LGKALDAETV RINQGMPLGV TLSKVTDQSV NIGSAVDEFM IKFFVALLVV MLVCFLSMGW
RVGVVVAAAV PLTLAMVFVV MEATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE
GYDRIKASAY AWSHTAAPML AGTLVTAVGF MPNGFAQSTA GEYTSNMFWI VGIALIASWI
VAVVFTPYLG VKMLPEIKPV EGGHAAIYDT AHYNRFRRAL AHVIARKWWV AGAVIAAFVV
AILGMGAVKK QFFPTSDRPE VLIEVQMPYG TSIEQTSATT AKVEAWLHQQ DAAKIVTSYI
GQGSPRFYLA MAPELPDPSF AKIVVLTESQ EAREALKLRI RQAVADGLAP EARVRVTQLV
FGPYSPFPVA YRVSGPAPDT LREIATRVET VMAASPMMRT VNSDWGTRVP ALHFSLDQDR
LQAVGLTSSA VARQLQFLLS GIPVTSVRED IRSVDVMGRA AGDIRLDPAK IEGFTLVGAA
GQRIPLSQAG VVEVRMEDPI LRRRDRVPTI TVRGDIAQDL QPPDVSAGIM KALQPIIDSL
PQGYRIEQAG SIEESAKATV ALAPLFPIMI AVTLLIIILQ VRSMSAMMMV FFTAPLGLIG
VVPTLLLFNQ PFGINALVGL IALSGILMRN TLILIGQIDH NEKQGLDPFH AVVEATVQRA
RPVLLTALAA ILAFIPLTHS VFWGTLAYTL IGGTLGGTVM TLVFLPAMYS IWFKIRPDRG
SLPRNSSSHA STGTEMKGI