Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2192 |
Symbol | |
ID | 3367707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2547814 |
End bp | 2548428 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637652542 |
Product | regulatory protein, TetR |
Protein accession | YP_235273 |
Protein GI | 66045432 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0820152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAATC AAATCAAGAC ATCGCCAATA CGCGGTCCCT CCGACCACAG CGTTCGCGAC CAGGTTGTCG AAGCGGCAAC ACAGCATTTC GGCCACTACG GCTATGAGAA AACCACGGTC TCCGATCTGG CCAAGGCCAT TGGTTTTTCC AAGGCCTACA TCTACAAGTT CTTCGACTCC AAGCAAGCTA TCGGCGAAGT GATCTGCTCG AACCGGCTGG CGATGATCAT GGCGCTGGTG AACTCGGCCA TCAGCGACGC GCCAACAGCC TCCGAGAGGC TGCGGCGCCT GTTCCGCTCG CTTGCGGAGG CGGGTAGCGA TCTGTTTTTT CACGACCGGA AGCTGTATGA CATAGCCGCT GTCGCAGGCC GTGATCAGTG GCCTTCTGCT GCCGCGCACG ACGAACGTAT TCGCCAGCTC ATCCAGCAAA TCCTTCTTGA GGGCAGGGAG TCCGGAGAGT TCGAGCGCAA GACACCTCTG GATGAGGCCG TTCAGGCCAT TCACCTGGTC ATGCGTCCGT ACATCAACCC GGTGCAATTG CAATACAACC TCGACATCGT GTCGACGGCC CCGGTCCATC TGTCGGCGTT GATACTGCGA AGTCTGGCAC CCTGA
|
Protein sequence | MTNQIKTSPI RGPSDHSVRD QVVEAATQHF GHYGYEKTTV SDLAKAIGFS KAYIYKFFDS KQAIGEVICS NRLAMIMALV NSAISDAPTA SERLRRLFRS LAEAGSDLFF HDRKLYDIAA VAGRDQWPSA AAHDERIRQL IQQILLEGRE SGEFERKTPL DEAVQAIHLV MRPYINPVQL QYNLDIVSTA PVHLSALILR SLAP
|
| |