Gene Psyr_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2192 
Symbol 
ID3367707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2547814 
End bp2548428 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content58% 
IMG OID637652542 
Productregulatory protein, TetR 
Protein accessionYP_235273 
Protein GI66045432 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0820152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATC AAATCAAGAC ATCGCCAATA CGCGGTCCCT CCGACCACAG CGTTCGCGAC 
CAGGTTGTCG AAGCGGCAAC ACAGCATTTC GGCCACTACG GCTATGAGAA AACCACGGTC
TCCGATCTGG CCAAGGCCAT TGGTTTTTCC AAGGCCTACA TCTACAAGTT CTTCGACTCC
AAGCAAGCTA TCGGCGAAGT GATCTGCTCG AACCGGCTGG CGATGATCAT GGCGCTGGTG
AACTCGGCCA TCAGCGACGC GCCAACAGCC TCCGAGAGGC TGCGGCGCCT GTTCCGCTCG
CTTGCGGAGG CGGGTAGCGA TCTGTTTTTT CACGACCGGA AGCTGTATGA CATAGCCGCT
GTCGCAGGCC GTGATCAGTG GCCTTCTGCT GCCGCGCACG ACGAACGTAT TCGCCAGCTC
ATCCAGCAAA TCCTTCTTGA GGGCAGGGAG TCCGGAGAGT TCGAGCGCAA GACACCTCTG
GATGAGGCCG TTCAGGCCAT TCACCTGGTC ATGCGTCCGT ACATCAACCC GGTGCAATTG
CAATACAACC TCGACATCGT GTCGACGGCC CCGGTCCATC TGTCGGCGTT GATACTGCGA
AGTCTGGCAC CCTGA
 
Protein sequence
MTNQIKTSPI RGPSDHSVRD QVVEAATQHF GHYGYEKTTV SDLAKAIGFS KAYIYKFFDS 
KQAIGEVICS NRLAMIMALV NSAISDAPTA SERLRRLFRS LAEAGSDLFF HDRKLYDIAA
VAGRDQWPSA AAHDERIRQL IQQILLEGRE SGEFERKTPL DEAVQAIHLV MRPYINPVQL
QYNLDIVSTA PVHLSALILR SLAP