Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2180 |
Symbol | |
ID | 3367695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2534124 |
End bp | 2535047 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637652530 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_235261 |
Protein GI | 66045420 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.15464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTCG TTCAACTCAA AACCTTGATT CATGTGGCCG AGCTAGGCAG TCTCAGCAAG GCCTCAGACC GGCTTCACAT CGCACAACCG GCACTCAGCC GACAAATTCG AATGCTAGAA AAAGAACTCG GCACCTACCT GTTTGATCGG CATGGACGAG GCATGGAGAT TACCGATGCT GGTCGCGAGG TGCTGGCGCA TGCCACTCGA ATCATGGAAG AAATGGAATC CATTCGAAGT TCAGTGGTGG GCGGAAAGAC CTCTTTTCGG GGAACGGTCG TCATCGGTAC GACGCCGACG GTAGCGGAAA TTGTCACCGT TCCTTTAGTG CGCAAAATCA AAGAGGCGCA TCCGAATCTT GCCGTCAGGT TTTCCTCGGC CTTCAGCGGT TATCTGCTGG ATTGGGTTCA GCGTGGCGAA TTGGAACTGG CGATTTCTTA CGATCCCCAA CCCCTGCATA CGCTGCGTAT CGTGCCGGTG ATGATGGAAA ACTTGCTGCT GGTCGGACCT GCCAGTGCCA AGCTGCGCCT GGATGTGCCG GTGTCATTCG AGTCTTTGGC CGAGCAGCAG TTGGTGTTGC CAAGCGCCCG CCACAGTCTT CGCGTGATTC TGGATAATTG TGCGCGAGAA GTCGGCATCA AGCTCAAAAC CAGCGTTGAA GCTGACTCCT TCGGCGCGAT GATTGACCTG GTTCGTAATG GCTTCGGTTT GACAGCTTTG CCACTGGCAT CAATTTACGC CCAAATCGAA GCTGGTGTGC TCAGTGCCGC CCCCTTGGTT GACCCTATTC CCATGCGCAA ACTTGTTCAG GTTTTTCCTG CCGACAGGCG TGTCAGTCCG GCTGCCAAAT TCGTCGGGGA TGCCTTCATC GAAATTGCTG CCGACCTGGT CAATCGTAAG ATTTGGGCTG GGCACATGCT TTGA
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Protein sequence | MDVVQLKTLI HVAELGSLSK ASDRLHIAQP ALSRQIRMLE KELGTYLFDR HGRGMEITDA GREVLAHATR IMEEMESIRS SVVGGKTSFR GTVVIGTTPT VAEIVTVPLV RKIKEAHPNL AVRFSSAFSG YLLDWVQRGE LELAISYDPQ PLHTLRIVPV MMENLLLVGP ASAKLRLDVP VSFESLAEQQ LVLPSARHSL RVILDNCARE VGIKLKTSVE ADSFGAMIDL VRNGFGLTAL PLASIYAQIE AGVLSAAPLV DPIPMRKLVQ VFPADRRVSP AAKFVGDAFI EIAADLVNRK IWAGHML
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