| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2179 |
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| Symbol | |
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| ID | 3367694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2532242 |
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| End bp | 2533618 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637652529 |
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| Product | major facilitator transporter |
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| Protein accession | YP_235260 |
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| Protein GI | 66045419 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT CAACCAGCGA CTCAACACGC CACACTGAAA AGTCCGATCA GATGAAAAGT
CCGAATCGTG TCAGAGCCAT CATGGGTGCC TGCTCGGGCA ATCTGGTGGA GTGGTACGAC
TTTTTCATTT ACGCCTATAC CGCCATCTAT TTTGCGAGCT CGTTTTTCCC CAAAGGCGAC
ACCACCAGTC AGTTGCTCGC AACCGCCGGC GTCTTCGCCG TCGGCTTTTT CATGCGGCCG
CTCGGCGGTT GGATTTTTGG CTGGATTGCT GATACCCGCG GCCGCAAGGT ATCGATGATT
ATCTCGGTGT TCATGATGTG CGCCGGTTCC TTGTTGATTG CCGTCATGCC GACCTATGAA
ACCATCGGTG TGGCGGCGCC AGTTTTGCTT GTCGTTGCCA GGCTGATTCA GGGTCTGTCA
GTCGGCGCGG AGTACGGCAC CGGCGCCACC TACATCAGTG AAATCGCGAC ACCTGGGCGT
CGTTGTTTCT ATGGATCATT CCAGTACTTC ACCATCATCG CAGGCCAACT CCTCGCCCTG
ATGACCGTGG TCATACTTCA ACAAACCCTT ACCGGCGAGG AATTGCGGGA ATGGGGCTGG
AGAATTCCTT TTTTCATCGG CGCCTTTAGT TCTATCGTAG TCGTGTATTT GCGTCGCGCG
ATGCATGAAA CCGCCACAAA AAAAGAAATG AACCGCAAAG ATGCCGGCTC GCTACGTGGC
ATGTTCAAAC ACAAACGCGC AGTGGCACTG GTGGTCGCGT TTACCATTGG CGGTTCACTT
TACTTCTACA CCTTCACCAC CTACATGCAG AAATTTCTGG TGATCTCTGC GGGGTTTAGT
CCGGAAACGG TGAGCTTCAT CATGACGGCC GCCCTGGTCG GTTTCATGTT TTGTCAGCCA
CTCTTTGGTC TGCTCGCCGA CCGAATCGGA ATCAAGGTCC ATATGTTGTT GTTTTCCGGG
TTGGCCATGC TACTGGTGAT CCCCCTGCTC TATTCACTGC AATCAGTCAG CAGTCCATTT
ACAGCGTTCC TGCTGGTATT TGGCGGCCTG GCAATCGCGT CGCTCTACAC CCCGATTGCC
GGTATCGTCA AAGCTGAACT GTTCCCGCCA GCGGTACGTG CATTGGGTGT GGGCTTTCCT
TATGCCGTCG GCAACGCGGC ATTCGGTGGC ACCGCCGAAT ACGTCGCCTT GTCGCTTCGG
TCGCAGGGTA TTGAGGAGTA TTTCTTCTTC TACGTCGCGG CCGTAGTAAC CATCACGTTC
ATCGCAGCGA CGCTAATGCC CAACCTGTCC CGCTATGGTT ACATCAGCGG CTCGGGTGAG
ATCGAAGAAC GCACCGGACT GAGGGGCTGC ATCAAATCGC AGGCTGCCAG GATCTGA
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| Protein sequence | MSASTSDSTR HTEKSDQMKS PNRVRAIMGA CSGNLVEWYD FFIYAYTAIY FASSFFPKGD
TTSQLLATAG VFAVGFFMRP LGGWIFGWIA DTRGRKVSMI ISVFMMCAGS LLIAVMPTYE
TIGVAAPVLL VVARLIQGLS VGAEYGTGAT YISEIATPGR RCFYGSFQYF TIIAGQLLAL
MTVVILQQTL TGEELREWGW RIPFFIGAFS SIVVVYLRRA MHETATKKEM NRKDAGSLRG
MFKHKRAVAL VVAFTIGGSL YFYTFTTYMQ KFLVISAGFS PETVSFIMTA ALVGFMFCQP
LFGLLADRIG IKVHMLLFSG LAMLLVIPLL YSLQSVSSPF TAFLLVFGGL AIASLYTPIA
GIVKAELFPP AVRALGVGFP YAVGNAAFGG TAEYVALSLR SQGIEEYFFF YVAAVVTITF
IAATLMPNLS RYGYISGSGE IEERTGLRGC IKSQAARI
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