Gene Psyr_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2171 
Symbol 
ID3367686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2524631 
End bp2525446 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID637652521 
ProductHpcH/HpaI aldolase 
Protein accessionYP_235252 
Protein GI66045411 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT CACTTGTTCG CTCCGCCCTG TTTGTGCCGG CCACTCGACC AGAGCGCATC 
TCAAAAGCTA TTGCCACCGG GGCGGATCGG GTCATCGTTG ACTTGGAAGA TGCCGTGCAA
GAAAACCTCA AGGAGCAGGC GAGGGATAAC CTCGACGCAT TTCTGAGCGA AGCCCCGGAT
GCACGAATTC TGGTCCGAGT GAATGCCCCG GATCACTGGG CGCATGTTGC GGACCTGGAT
CTTTGCCGAC GCCACGCTGG CGTTATCGGA ATTCTGCTGC CCAAAGCAGA AAGCGCGAAA
CAGGTCACCA CAGCTGCCGG TACCGAAAAA CCGATTTGGC CAATCATCGA GAGCGCGAAG
GGCTTGTCAG CACTCAACGA AATTGCCGGC ACTCAAGGCG TTGAGCGGTT GTCGTTCGGT
AGTCTGGATC TGGGTCTGGA CCTGAACCTG ACTACTGGCA GCCCTGCCGC CGAAGAAATC
CTTAGCCATG CGCGCTACGC CGTTTTGCTC GCCACCCGGG TTGCAGCGCT CGCTCCAGCG
TTGGATGGGG TATTTCCGTC GTTCCAGGAC ACCGCTGGGC TACTACGCGC GGTTCATTTT
GCACGCGACA TGGGCTTTGG TGGCGCGCTG TGTATCCATC CAACCCAAGT CGCAATCATT
CATCAGGCGC TAAAACCAAG CCAGGAAGAA TTGCAGTGGG CGCAACGCAT TATCGAAGCC
GCTCGTTCAG GTGAAGGCGT TTTCGTGCTG GATGGGCAAA TGGTCGATGC GCCGGTCATT
GGTCGCGCGC AATCCATTTT GGCTCGCGCG ATCTGA
 
Protein sequence
MSKSLVRSAL FVPATRPERI SKAIATGADR VIVDLEDAVQ ENLKEQARDN LDAFLSEAPD 
ARILVRVNAP DHWAHVADLD LCRRHAGVIG ILLPKAESAK QVTTAAGTEK PIWPIIESAK
GLSALNEIAG TQGVERLSFG SLDLGLDLNL TTGSPAAEEI LSHARYAVLL ATRVAALAPA
LDGVFPSFQD TAGLLRAVHF ARDMGFGGAL CIHPTQVAII HQALKPSQEE LQWAQRIIEA
ARSGEGVFVL DGQMVDAPVI GRAQSILARA I