| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2165 |
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| Symbol | rplT |
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| ID | 3367679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2518493 |
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| End bp | 2518849 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637652514 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_235246 |
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| Protein GI | 66045405 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000386102 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTG TAAAGCGTGG CGTCATTGCC CGTAAGCGTC ACAAAAAAAT TCTGAAACTT
GCAAAAGGCT ACTACGGCGC GCGTTCACGC GTATTCCGTG TTGCCAAGCA AGCGGTAATC
AAGGCAGGCC AATACGCCTA CCGTGACCGT CGTCAGAAAA AACGTCAGTT CCGCGCTCTG
TGGATCGCTC GTATCAACGC TGGTGCTCGT GTTAACGGTC TGTCCTACAG CCGTTTCATT
GCTGGCCTGA AAAAAGCGTC CATCGAGATC GACCGTAAGG TTCTGGCTGA TCTGGCAGTG
AACGAAAAAG CGGCGTTTGC TGCGATTGTC GAGAAAGCTA AAGCCACCTT GGCCTAA
|
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| Protein sequence | MARVKRGVIA RKRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQKKRQFRAL
WIARINAGAR VNGLSYSRFI AGLKKASIEI DRKVLADLAV NEKAAFAAIV EKAKATLA
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