| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2156 |
|---|
| Symbol | |
|---|
| ID | 3367670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2512184 |
|---|
| End bp | 2512588 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637652505 |
|---|
| Product | D-ribose pyranase |
|---|
| Protein accession | YP_235237 |
|---|
| Protein GI | 66045396 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000592417 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.580313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CCCCGCTACT CAATATTGCC CTGTCCCGCG TGATTGCATC GCTGGGTCAC
GGTGACATCC TGATGATCGT CGACGCCGGC ATGCCAGTAC CGGCAGGCGT CGAACTGATC
GACCTCGCGC TGACCCGCGG TGTGCCGGAT TTCATCAGTG TGCTGGATGT CGTGCTGAGT
GAAATGCAGG TTGAAAGCCA CGTACTGGCC AATGAGATGG CCGAGGTCAA ACCGCCTGCG
TTGCAGGTGA TCGAAAGCCT GAATCTCGAA GACCAGTTGG GGCAACAACG CTGGATTAGC
CACGAAGACC TCAAGGTCCT GAGTCGCAAG GCCAAGGCAA TCATCCGTAC CGGAGAATGT
CAGCCGTACA GTAATGTGGC GCTGGTATCC GGAGTCGTCT TCTAA
|
|---|
| Protein sequence | MKKTPLLNIA LSRVIASLGH GDILMIVDAG MPVPAGVELI DLALTRGVPD FISVLDVVLS
EMQVESHVLA NEMAEVKPPA LQVIESLNLE DQLGQQRWIS HEDLKVLSRK AKAIIRTGEC
QPYSNVALVS GVVF
|
|---|
| |