Gene Psyr_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2154 
Symbol 
ID3367668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2510220 
End bp2511236 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content60% 
IMG OID637652503 
ProductLacI transcriptional regulator 
Protein accessionYP_235235 
Protein GI66045394 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0306626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.912687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCAAGGATGT CGCGGCCCTG GCGGGGATCT CGTACACCAC GGTTTCCCAC 
GTGTTGAACA ATACCCGGCC GGTGAGCGAG CCGGTCAGGC TCAAGGTCGA AGCCGCCATT
GCACAGCTCG ATTATGTGCC CAGTGCAGTG GCGCGTTCGC TGAAGGCCAA GACCACCTCG
ACCATCGGCC TGTTGATTCC CAACGGCATG AACCCGTATT TCGCCGAGTT GGCGCGGGGC
ATCGAGGATT ACTGCGAGCG CAACGGTTTT TGCGTGATCC TCTGCAACTC CGATGATAAT
CCGGAGAAAC AGCGTGGTTA TCTGCGCGTG CTGCTGGAAA AGCGCGTGGA CGGGCTGATT
GTTTCTTCGG TGGGTGGCGA CGCGGGTATT GCAGGTGGCC TTGCCGAGGT ACGTACGCCG
CTGGTGATCG TTGACCGGGA GCTGGACGGT ATCGATGCCG ACATGGTCCG TATCGACCAT
GAACAGGGTG CTTATCTGGC AACCCGGCAC TTGCTGGACC TGGGACATCG CGCCATTGCC
TGTATTGGTG GGCCATTTCA CAGCACAGTG GCCGAGATGC GTCTGGCGGG TTATCGGCGC
GCCTTGCAAC AGGCGTCCGT TCCGGTCCGT GCCGAATGGG CGCTGCACAG TGAGTTCACC
AGCTCTGCCG GTCATGAGGC AGCGTGTCAG CTTCTGGCAG CGCATCCGCC GACCGCGATT
TTTGCCGGCA ACGACGTCAT CGCCATCGGT GTGCTGCGCG CCGCCGCCGA GCGCTTGATT
CGTGTGCCTC AGGACCTGTC GGTGATCGGT TTCGATGATA TCCAGATGAG TCGCTACGTT
TATCCGGCGC TGACCACCGT GGGGCAGTCA ATCATGCAAC TGGGCGAAAC CGCTGCAGAA
ATGCTGCTGA GCAGAATCGC CACACCCCAT GCGCTTCCTG CCGAAAAAAG GCTCGTGACG
CCCAGCGTCG TGGTGCGCGA GTCTACGGCA GCGCCAAACA CTTTATCCAA CGAATGA
 
Protein sequence
MATIKDVAAL AGISYTTVSH VLNNTRPVSE PVRLKVEAAI AQLDYVPSAV ARSLKAKTTS 
TIGLLIPNGM NPYFAELARG IEDYCERNGF CVILCNSDDN PEKQRGYLRV LLEKRVDGLI
VSSVGGDAGI AGGLAEVRTP LVIVDRELDG IDADMVRIDH EQGAYLATRH LLDLGHRAIA
CIGGPFHSTV AEMRLAGYRR ALQQASVPVR AEWALHSEFT SSAGHEAACQ LLAAHPPTAI
FAGNDVIAIG VLRAAAERLI RVPQDLSVIG FDDIQMSRYV YPALTTVGQS IMQLGETAAE
MLLSRIATPH ALPAEKRLVT PSVVVRESTA APNTLSNE