Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2154 |
Symbol | |
ID | 3367668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2510220 |
End bp | 2511236 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652503 |
Product | LacI transcriptional regulator |
Protein accession | YP_235235 |
Protein GI | 66045394 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0306626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.912687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA TCAAGGATGT CGCGGCCCTG GCGGGGATCT CGTACACCAC GGTTTCCCAC GTGTTGAACA ATACCCGGCC GGTGAGCGAG CCGGTCAGGC TCAAGGTCGA AGCCGCCATT GCACAGCTCG ATTATGTGCC CAGTGCAGTG GCGCGTTCGC TGAAGGCCAA GACCACCTCG ACCATCGGCC TGTTGATTCC CAACGGCATG AACCCGTATT TCGCCGAGTT GGCGCGGGGC ATCGAGGATT ACTGCGAGCG CAACGGTTTT TGCGTGATCC TCTGCAACTC CGATGATAAT CCGGAGAAAC AGCGTGGTTA TCTGCGCGTG CTGCTGGAAA AGCGCGTGGA CGGGCTGATT GTTTCTTCGG TGGGTGGCGA CGCGGGTATT GCAGGTGGCC TTGCCGAGGT ACGTACGCCG CTGGTGATCG TTGACCGGGA GCTGGACGGT ATCGATGCCG ACATGGTCCG TATCGACCAT GAACAGGGTG CTTATCTGGC AACCCGGCAC TTGCTGGACC TGGGACATCG CGCCATTGCC TGTATTGGTG GGCCATTTCA CAGCACAGTG GCCGAGATGC GTCTGGCGGG TTATCGGCGC GCCTTGCAAC AGGCGTCCGT TCCGGTCCGT GCCGAATGGG CGCTGCACAG TGAGTTCACC AGCTCTGCCG GTCATGAGGC AGCGTGTCAG CTTCTGGCAG CGCATCCGCC GACCGCGATT TTTGCCGGCA ACGACGTCAT CGCCATCGGT GTGCTGCGCG CCGCCGCCGA GCGCTTGATT CGTGTGCCTC AGGACCTGTC GGTGATCGGT TTCGATGATA TCCAGATGAG TCGCTACGTT TATCCGGCGC TGACCACCGT GGGGCAGTCA ATCATGCAAC TGGGCGAAAC CGCTGCAGAA ATGCTGCTGA GCAGAATCGC CACACCCCAT GCGCTTCCTG CCGAAAAAAG GCTCGTGACG CCCAGCGTCG TGGTGCGCGA GTCTACGGCA GCGCCAAACA CTTTATCCAA CGAATGA
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Protein sequence | MATIKDVAAL AGISYTTVSH VLNNTRPVSE PVRLKVEAAI AQLDYVPSAV ARSLKAKTTS TIGLLIPNGM NPYFAELARG IEDYCERNGF CVILCNSDDN PEKQRGYLRV LLEKRVDGLI VSSVGGDAGI AGGLAEVRTP LVIVDRELDG IDADMVRIDH EQGAYLATRH LLDLGHRAIA CIGGPFHSTV AEMRLAGYRR ALQQASVPVR AEWALHSEFT SSAGHEAACQ LLAAHPPTAI FAGNDVIAIG VLRAAAERLI RVPQDLSVIG FDDIQMSRYV YPALTTVGQS IMQLGETAAE MLLSRIATPH ALPAEKRLVT PSVVVRESTA APNTLSNE
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