Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2153 |
Symbol | |
ID | 3367667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2509226 |
End bp | 2510218 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652502 |
Product | inner-membrane translocator |
Protein accession | YP_235234 |
Protein GI | 66045393 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.654738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.63081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA CTCCTTCTCC GACGCTGACT GTGCCAGTCC GTCGCGGCGG CAACTACTTT GGCCTGGGTA CCTACATCGG GCTGGCCGGT GCGTTGCTGG TGATGATCGT GCTGTTCTCG CTGCTCAGCG ATCACTTCCT GTCCTACCAG ACCTTCAGCA TGCTCGCCAA CCAGATCCCG GACCTGATGG TGCTGTCGGT CGGCATGACG CTGATCCTCA TCATCGGCGG CATCGACCTG TCGGTCGGCT CGGTGCTGGC GCTGGCTGCT TCGGCGGTCA GTGTGGCAAT CCTCGGCTGG GGCTGGAGCG TGTTTCCGGC GGCGTTGCTG GGCATTGCCT GTGCGACGCT GGCGGGTACG ATCACCGGCT CGATTACGGT TGCCTGGCGC ATCCCTTCGT TCATCGTGTC TCTGGGCGTG CTGGAAATGG CTCGTGGTGC GGCCTATCAG ATGACCAATT CGCGTACCGC CTACATCGGT GATTCGTTCG CCTGGCTGTC CGATCCGATT GCCTTTGGCA TTGCGCCGTC TTTCATCATC GCGTTGCTGA TCATCTTCGT CGCTCAGGCG GTACTGACCC GGACCGTTTT CGGTCGCTAC CTGATCGGCA TCGGCACCAA TGAAGAGGCC GTGCGTCTGG CGGGTATCAA TCCCAAGCCT TACAAGATTC TGGTGTTCTC GCTGATGGGG CTGCTGGCCG GTGTCGCGGC ACTGTTTCAG ATATCCAGGC TGGAAGCGGC CGATCCGAAT GCCGGTGCCG GGCTTGAGCT GCAGGTCATT GCGGCAGTGG TGATTGGCGG TACCAGCCTG ATGGGCGGAC GCGGTTCGAT CATCAGCACC TTTTTCGGTG TGCTGATCAT TTCCGTGCTG GCCGCGGGCC TGGCGCAGAT CGGTGCGACC GAGCCGACCA AGCGGATCAT CACCGGTGCG GTGATCGTGA TTGCTGTGGT GCTGGACACC TACCGCAGCC ACCGGGCTCG GCGCCAGGGC TGA
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Protein sequence | MKNTPSPTLT VPVRRGGNYF GLGTYIGLAG ALLVMIVLFS LLSDHFLSYQ TFSMLANQIP DLMVLSVGMT LILIIGGIDL SVGSVLALAA SAVSVAILGW GWSVFPAALL GIACATLAGT ITGSITVAWR IPSFIVSLGV LEMARGAAYQ MTNSRTAYIG DSFAWLSDPI AFGIAPSFII ALLIIFVAQA VLTRTVFGRY LIGIGTNEEA VRLAGINPKP YKILVFSLMG LLAGVAALFQ ISRLEAADPN AGAGLELQVI AAVVIGGTSL MGGRGSIIST FFGVLIISVL AAGLAQIGAT EPTKRIITGA VIVIAVVLDT YRSHRARRQG
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