Gene Psyr_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2148 
Symbol 
ID3367662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2505150 
End bp2505851 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content58% 
IMG OID637652497 
Productdeoxyribonuclease I 
Protein accessionYP_235229 
Protein GI66045388 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000104352 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTC GATTCTCTAA ACTGCTTTGC ACCGCCCTGC TCATCACCGC ATCGTTCGCC 
GCCCAGGCAC AAGCCCCGCG CACCTTCAGC GAAGCCAAGA AAGTTGCCTG GGGCTTGTAT
GCGCCGCAGT CGACCGAGTT TTACTGCGGC TGCAAATACA CCGGCAATCG AGTCGATCTC
GCTGGCTGCG GCTACGTCCC GCGCAAGAGC GCCAAACGCG CCAGTCGTAT TGAATGGGAG
CACATTGTGC CTGCCTGGCA GATCGGCCAC CTGCGCCAAT GCTGGCAGAA CGGCGGGCGC
AAGAACTGCA CAAAAACCGA CCCGGTCTAC AAACGCGCCG AGGCGGACCT GCATAATCTG
GTGCCCAGCA TCGGCGAGGT CAACGGCGAC CGCAGCAATT TCAGTTTTGG CTGGATACCC
GAACAAAAGG GTCAGTACGG TTCTTGCCTG ACGCAAGTGG ATTTCAAGGC CAAAAAGGTC
ATGCCCCGCC CCTCGATACG CGGCATGATT GCGCGCACCT ACTTCTACAT GAGCAAACAA
TACAACTTGC GTCTCTCGCG CCAGGACCAA CAGCTTTATC AAGCCTGGGA CAAAACCTAT
CCGCCCCAGG CATGGGAGCG CCAGCGTAAC CAGCAGGTCG CCTGTGTCAT GGGGCGTGGC
AATGATTTTG TAGGCCCGGT AGACCTGAAG TCGTGTAAAT AA
 
Protein sequence
MTFRFSKLLC TALLITASFA AQAQAPRTFS EAKKVAWGLY APQSTEFYCG CKYTGNRVDL 
AGCGYVPRKS AKRASRIEWE HIVPAWQIGH LRQCWQNGGR KNCTKTDPVY KRAEADLHNL
VPSIGEVNGD RSNFSFGWIP EQKGQYGSCL TQVDFKAKKV MPRPSIRGMI ARTYFYMSKQ
YNLRLSRQDQ QLYQAWDKTY PPQAWERQRN QQVACVMGRG NDFVGPVDLK SCK