Gene Psyr_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2146 
Symbol 
ID3367660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2503827 
End bp2504618 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID637652495 
Productpeptidase M24A 
Protein accessionYP_235227 
Protein GI66045386 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00623743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0449279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG CTATCGGTAT CAAGACCGAA CAGGACCTCG TGCAGTTGCG CATAGCCGGC 
AGGCTGGCTG CCGATGTGCT CGCGATGATC ACGCCTTACG TCAAGGCTGG CGTCAGCACC
GAAGCGCTCG ACGACATCTG CAATGAATAC ATCGTCAAAG AGCTGAAAGT GATTCCCGCG
AATGTGGGTT ATCACGGTTT TACCAAGACC ACCTGCATCT CCCCGAATGC CGTAGTGTGC
CATGGCATAC CTTCTGCCAC CGATATCCTC AAGGAAGGCG ATATCGTCAA TATCGACGTT
GCAGTGATCA AAGACGGCTG GTACGGCGAT ACCAGCCGTA TGTACCTGGT GGGTGAGGTC
AGCCCGCTGG CCAGGCGTCT GGTCGAGACG ACCTATGAGG CAACTCGCGC CGGTATTCAT
GCCGTGCGTC CGGGGGCAAC CCTGGGTGAT ATCGGTTACG CCATCCAGAG CGTCGCTCAT
CGCGAAGGCT TCAGCGTGGT ACGTGAGTAT TGCGGGCACG GTATCGGGCG CAAGTACCAT
GAAGAACCGC AGGTTCTGCA CTATGGTGCG CAGGGCAAAG GCCTCAGGCT CAAACCGGGC
ATGGTGTTTA CCATCGAGCC GATGATCAAT GCGGGCAGGG CGGGCACCCG GACGTTGCCG
GATGGCTGGA CGGTTCTGAC CAGCGACCTC TCACTGTCTG CGCAGTGGGA GCATATGGTT
GCCGTCACCT CGACCGGTTT CGAGCTGCTG ACGCCGTGGC CTGACGGTAC GGGTGATTAC
CCGGCCATCT GA
 
Protein sequence
MSSAIGIKTE QDLVQLRIAG RLAADVLAMI TPYVKAGVST EALDDICNEY IVKELKVIPA 
NVGYHGFTKT TCISPNAVVC HGIPSATDIL KEGDIVNIDV AVIKDGWYGD TSRMYLVGEV
SPLARRLVET TYEATRAGIH AVRPGATLGD IGYAIQSVAH REGFSVVREY CGHGIGRKYH
EEPQVLHYGA QGKGLRLKPG MVFTIEPMIN AGRAGTRTLP DGWTVLTSDL SLSAQWEHMV
AVTSTGFELL TPWPDGTGDY PAI