Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2139 |
Symbol | |
ID | 3367653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2497985 |
End bp | 2499793 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652488 |
Product | potassium efflux system protein |
Protein accession | YP_235220 |
Protein GI | 66045379 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.199243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCATG AAGGCAGCCT GCTGCAGGTC GCAGTGGTAT TCCTGCTCGC CGCCGTGCTG ACTGTGCCGC TGGCCAAGCG GTTGAAGCTG GGCGCGGTGA TCGGCTATTT GTTCGCCGGC GTGGTCATCG GCCCTTCGGT ATTGGGCCTG ATCGGTGATA CCGAGAGCGT CAGCCATATT TCCGAACTTG GCGTGGTACT GCTGCTGTTC ATCATTGGCC TGGAGCTTTC GCCCAAACGT TTATGGGTCA TGCGCAAATC CGTGTTTGGC GTAGGCATGG CGCAGGTACT GCTGACCGGC CTGATCATCG GCGGGGTCGC CTTCGCTGCC TTCGGCCAGT CGCTGAACAC CGCGGCCATT CTGGGCCTGG GCCTTGCCCT GTCGTCCACG GCCTTCGGCC TGCAGAGCCT GGCGGAACGC AAACAGCTGA ACAGCCCGCA CGGCAGGATG GCGTTCGCGA TTCTGCTGTT TCAGGACATT GCGGCGATCC CGCTGATTGC CATGGTGCCG TTTCTGGCCG GGGCTGACCA CGCGATGGAC ACCGGCGAAA GCATCAACCA CGGTCTGCGC GTGCTGGGCA GCATTGCCAT TGTGGTGATT GGCGGGCGCT ATTTGCTGCG CCCGGTGTTC CGGATCGTCG CCAAGACCAA AATCCAGGAA GTTTCGACCG CCACGGCCTT GCTGGTGGTG ATAGGCACAG CGTGGCTGAT GGAACTGGTG GGAGTGTCCA TGGCGCTGGG CGCGTTTCTT GCTGGCCTGT TGCTGGCCGA CTCCGAATAC CGTCACGAAC TGGAAGCACA GATCGAACCG TTCAAAGGGT TATTGCTGGG GCTGTTCTTC ATCAGTGTCG GCATGGGCGC CAACGTTGGC CTGTTGCTCA GCTCGCCGCT GATCGTGCTG GGCCTGACGC TGTTGCTGAT CGCAATCAAG CTGCCGATGC TGTTCCTGAT CGGTCGCACC CTTGGCGAAC TCAACAACCG CAGCGCGCTG CAGCTGGGTC TGGTACTGGC CGCAGGCGGC GAGTTTGCCT TTGTGGTGTT CAAGATCGGC AGCGCTCAGG GGCTGTTCGA GGCCGGGCTA TACGACATGC TGGTGTTGAC CATCACCTTG TCGATGGCGG TCACGCCGTT GCTGTTCATT GCTCTGGCGC GCTGGATCAA ACCCAAGGTC AAGCCTGTCG AGGTGCCGGA GGAATACCGC GATATCCAGA CCGACAAACC ACGCGTCGTC ATTGCCGGCA TGGGCCGTAT GGGACAGATT GTCGCGCGTA TCCTGCGCGC GCAGAAGATT CCTTTCATCG CCCTGGATAC CGCCGTCGAG TCCATCGAGT TCTCCCGTAG CTTTGGCAAT GTACCGGTCT TCTATGGCGA CCCGTTGCGC CCGGAGATAC TGCGTGCCGC CAAAGTCGAT GAGGCCGAAT ACTTCGTCAT CGCGACCGAT GATCCTGACA CCAACATCAA GACTGCCGAG CTGATCCGCA AGCTGTATCC GCACATGAAG ATCATTGCCC GCGCACGTAA CCGCCAGCAT GTTCATCGGT TGATGGACCT GGGCGCTCAC GCGGTTCGCG AAACGTTCTA TTCAAGCCTG GAAATGAGTC GCCAGACCCT CATGGGCCTG GGCCTCAGCG AAACACAGGC CGACGCACGC ATCAGTCGCT TCAAACGTCA CGACGAACAG GTGCTGGCCG CTCAGCATGA GGTGTATGAC GACGACGCCA AGGTCCTGCA GACCGCCCGC GAAGCCAGGG CCGACCTCGC GCAACTGTTC GAGGCAGACC GTCTGGACGA AGAAGCCGCG AAAAGCTGA
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Protein sequence | MPHEGSLLQV AVVFLLAAVL TVPLAKRLKL GAVIGYLFAG VVIGPSVLGL IGDTESVSHI SELGVVLLLF IIGLELSPKR LWVMRKSVFG VGMAQVLLTG LIIGGVAFAA FGQSLNTAAI LGLGLALSST AFGLQSLAER KQLNSPHGRM AFAILLFQDI AAIPLIAMVP FLAGADHAMD TGESINHGLR VLGSIAIVVI GGRYLLRPVF RIVAKTKIQE VSTATALLVV IGTAWLMELV GVSMALGAFL AGLLLADSEY RHELEAQIEP FKGLLLGLFF ISVGMGANVG LLLSSPLIVL GLTLLLIAIK LPMLFLIGRT LGELNNRSAL QLGLVLAAGG EFAFVVFKIG SAQGLFEAGL YDMLVLTITL SMAVTPLLFI ALARWIKPKV KPVEVPEEYR DIQTDKPRVV IAGMGRMGQI VARILRAQKI PFIALDTAVE SIEFSRSFGN VPVFYGDPLR PEILRAAKVD EAEYFVIATD DPDTNIKTAE LIRKLYPHMK IIARARNRQH VHRLMDLGAH AVRETFYSSL EMSRQTLMGL GLSETQADAR ISRFKRHDEQ VLAAQHEVYD DDAKVLQTAR EARADLAQLF EADRLDEEAA KS
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