Gene Psyr_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2139 
Symbol 
ID3367653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2497985 
End bp2499793 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content61% 
IMG OID637652488 
Productpotassium efflux system protein 
Protein accessionYP_235220 
Protein GI66045379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.199243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCATG AAGGCAGCCT GCTGCAGGTC GCAGTGGTAT TCCTGCTCGC CGCCGTGCTG 
ACTGTGCCGC TGGCCAAGCG GTTGAAGCTG GGCGCGGTGA TCGGCTATTT GTTCGCCGGC
GTGGTCATCG GCCCTTCGGT ATTGGGCCTG ATCGGTGATA CCGAGAGCGT CAGCCATATT
TCCGAACTTG GCGTGGTACT GCTGCTGTTC ATCATTGGCC TGGAGCTTTC GCCCAAACGT
TTATGGGTCA TGCGCAAATC CGTGTTTGGC GTAGGCATGG CGCAGGTACT GCTGACCGGC
CTGATCATCG GCGGGGTCGC CTTCGCTGCC TTCGGCCAGT CGCTGAACAC CGCGGCCATT
CTGGGCCTGG GCCTTGCCCT GTCGTCCACG GCCTTCGGCC TGCAGAGCCT GGCGGAACGC
AAACAGCTGA ACAGCCCGCA CGGCAGGATG GCGTTCGCGA TTCTGCTGTT TCAGGACATT
GCGGCGATCC CGCTGATTGC CATGGTGCCG TTTCTGGCCG GGGCTGACCA CGCGATGGAC
ACCGGCGAAA GCATCAACCA CGGTCTGCGC GTGCTGGGCA GCATTGCCAT TGTGGTGATT
GGCGGGCGCT ATTTGCTGCG CCCGGTGTTC CGGATCGTCG CCAAGACCAA AATCCAGGAA
GTTTCGACCG CCACGGCCTT GCTGGTGGTG ATAGGCACAG CGTGGCTGAT GGAACTGGTG
GGAGTGTCCA TGGCGCTGGG CGCGTTTCTT GCTGGCCTGT TGCTGGCCGA CTCCGAATAC
CGTCACGAAC TGGAAGCACA GATCGAACCG TTCAAAGGGT TATTGCTGGG GCTGTTCTTC
ATCAGTGTCG GCATGGGCGC CAACGTTGGC CTGTTGCTCA GCTCGCCGCT GATCGTGCTG
GGCCTGACGC TGTTGCTGAT CGCAATCAAG CTGCCGATGC TGTTCCTGAT CGGTCGCACC
CTTGGCGAAC TCAACAACCG CAGCGCGCTG CAGCTGGGTC TGGTACTGGC CGCAGGCGGC
GAGTTTGCCT TTGTGGTGTT CAAGATCGGC AGCGCTCAGG GGCTGTTCGA GGCCGGGCTA
TACGACATGC TGGTGTTGAC CATCACCTTG TCGATGGCGG TCACGCCGTT GCTGTTCATT
GCTCTGGCGC GCTGGATCAA ACCCAAGGTC AAGCCTGTCG AGGTGCCGGA GGAATACCGC
GATATCCAGA CCGACAAACC ACGCGTCGTC ATTGCCGGCA TGGGCCGTAT GGGACAGATT
GTCGCGCGTA TCCTGCGCGC GCAGAAGATT CCTTTCATCG CCCTGGATAC CGCCGTCGAG
TCCATCGAGT TCTCCCGTAG CTTTGGCAAT GTACCGGTCT TCTATGGCGA CCCGTTGCGC
CCGGAGATAC TGCGTGCCGC CAAAGTCGAT GAGGCCGAAT ACTTCGTCAT CGCGACCGAT
GATCCTGACA CCAACATCAA GACTGCCGAG CTGATCCGCA AGCTGTATCC GCACATGAAG
ATCATTGCCC GCGCACGTAA CCGCCAGCAT GTTCATCGGT TGATGGACCT GGGCGCTCAC
GCGGTTCGCG AAACGTTCTA TTCAAGCCTG GAAATGAGTC GCCAGACCCT CATGGGCCTG
GGCCTCAGCG AAACACAGGC CGACGCACGC ATCAGTCGCT TCAAACGTCA CGACGAACAG
GTGCTGGCCG CTCAGCATGA GGTGTATGAC GACGACGCCA AGGTCCTGCA GACCGCCCGC
GAAGCCAGGG CCGACCTCGC GCAACTGTTC GAGGCAGACC GTCTGGACGA AGAAGCCGCG
AAAAGCTGA
 
Protein sequence
MPHEGSLLQV AVVFLLAAVL TVPLAKRLKL GAVIGYLFAG VVIGPSVLGL IGDTESVSHI 
SELGVVLLLF IIGLELSPKR LWVMRKSVFG VGMAQVLLTG LIIGGVAFAA FGQSLNTAAI
LGLGLALSST AFGLQSLAER KQLNSPHGRM AFAILLFQDI AAIPLIAMVP FLAGADHAMD
TGESINHGLR VLGSIAIVVI GGRYLLRPVF RIVAKTKIQE VSTATALLVV IGTAWLMELV
GVSMALGAFL AGLLLADSEY RHELEAQIEP FKGLLLGLFF ISVGMGANVG LLLSSPLIVL
GLTLLLIAIK LPMLFLIGRT LGELNNRSAL QLGLVLAAGG EFAFVVFKIG SAQGLFEAGL
YDMLVLTITL SMAVTPLLFI ALARWIKPKV KPVEVPEEYR DIQTDKPRVV IAGMGRMGQI
VARILRAQKI PFIALDTAVE SIEFSRSFGN VPVFYGDPLR PEILRAAKVD EAEYFVIATD
DPDTNIKTAE LIRKLYPHMK IIARARNRQH VHRLMDLGAH AVRETFYSSL EMSRQTLMGL
GLSETQADAR ISRFKRHDEQ VLAAQHEVYD DDAKVLQTAR EARADLAQLF EADRLDEEAA
KS