Gene Psyr_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2138 
Symbol 
ID3367652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2497022 
End bp2497948 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content59% 
IMG OID637652487 
Productglycosyl transferase family protein 
Protein accessionYP_235219 
Protein GI66045378 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.177505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.63081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCAT TGAGAGTGGC TTGTGTGATC CCGACCTACA ACGGACGCAA GGATCTGGAA 
CGTCTCCTGG ATTCACTGGC TGCGCAGACT GCCAGCTTCG ATACGCTGAT CGTGGACTCC
AGTTCCTCGG ATGGCACGCT GGAGCTGGCG CAAGCGCGAT GTGCCAATGT GCTGCGCATC
GACAGCAAGG ATTTCAACCA CGGCGGCACC CGGCAGATGA TGGTCGATCT GCATCCCGAC
TATGACGTGT ATGTCTTCAT GACCCAGGAT GCGTACGTTG AAGACATCAA TGCCATTGCC
AACATTCTGT TGCCCTTCGC CGACCCGAAG GTCGGTGCTG TGTGCGGGCG ACAGCTGCCG
CACAAGGATG CCAACCTGCT GGCCCAGCAT GCACGGTTGT TCAATTACCC GCCGACCTCG
CAGATCAAAA CGCTGGCCGA TGCCGGGACG CTGGGCATCA AGACGCCATT CATGTCCAAC
TCGTTTGCGG CCTATCGGGG CGAAGCGTTG CGGGCCATTG GCGGTTTCCC GCGGCATGTG
ATTCTTTCAG AAGACATGTA CGTCACCGCG AAAATGCTCA TCGATGGCTG GAAAGCGGCT
TACGAAGGCT CGGCGGTCTG CCGTCACTCC CACAATTACA GCCTGCGCGA AGAGTTTCGT
CGTTACTTTG ATATCGGTGT GTTCCAGGCC CGCGAAGCGT GGATCTACGA AACCTTTGGC
GGCATTGGTG GCGAGGGCAT GCGTTACGTC AAGTCCGAGC TGAAATTCCT CGGTCCCCGG
CGAATCCTCT GGTGGCCTGT GTCGTTCGTG CGTAATGCGC TGAAGCTGCT GGCCTACAAG
CTGAGCCGGC AGGAAAAACG CTTGCCCCGC GGCGTGAAGA AGAAGCTCGG CATGTACGCG
CGTTACTGGG ACAGCCCCTA CGCCTGA
 
Protein sequence
MAPLRVACVI PTYNGRKDLE RLLDSLAAQT ASFDTLIVDS SSSDGTLELA QARCANVLRI 
DSKDFNHGGT RQMMVDLHPD YDVYVFMTQD AYVEDINAIA NILLPFADPK VGAVCGRQLP
HKDANLLAQH ARLFNYPPTS QIKTLADAGT LGIKTPFMSN SFAAYRGEAL RAIGGFPRHV
ILSEDMYVTA KMLIDGWKAA YEGSAVCRHS HNYSLREEFR RYFDIGVFQA REAWIYETFG
GIGGEGMRYV KSELKFLGPR RILWWPVSFV RNALKLLAYK LSRQEKRLPR GVKKKLGMYA
RYWDSPYA