| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2111 |
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| Symbol | |
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| ID | 3367625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2467163 |
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| End bp | 2468629 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637652460 |
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| Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
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| Protein accession | YP_235192 |
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| Protein GI | 66045351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.322928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.261946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGT CGCTACGTCC ATTGTTGCTC GCGTCACTCC TTTTGCCCCT GGCCCTACCC
TCCTACGCTG CCGTCATCAA CACCACGCTG CCCCCCAAGG TTCAACAGGC CCTGAAAGCC
AGCAAACTCG GCGATGACGC ACTCTCGCTG GTGATGCTGC CGCTCAACGG CCCAGGTACA
CCGACCGTGT TCAACGCCGA CGTATCGGTC AATCCGGCGT CTACCATGAA GCTGATTACC
ACCTACGCGG CCCTTGAAAT GCTCGGCCCG ACCCACCAGT GGAAAACCGA ATTCTTCACC
GACGGCACCC TGAGCAACGG CGTGCTGCGC GGCAACCTGT ACCTCAAGGG CGGCGGCGAT
CCCAAGCTGA ATATGGAAAA GCTCTGGCTG CTGATGCGTG ACCTGCGCGC CAATGGTGTA
CAGCAGGTGA CCGGCGATCT GGTTCTCGAC CGCAGTCATT TTGTGCAACC GCAATTGCCG
GTGTTCAACG ATGACGGCAA TGACGACAAC AAGCCGTTTC TGGTCAAGCC CGACGCGCTG
ATGGTCAACC TCAAGGCGCT ACGCTTCGTG ACCCGCAATG ATGACGGCAG GATTCTGGTC
TCGGTCGAGC CGCCGATTGC CAGCATTCGC ATTGATAATC AGGTCAAGGC AAGCGCCTCG
AAACAATGCA CCGGGGATGT GCGCTACAAC CCGGTCACCC AGGCGGATGG CAGCGTCAAC
GTGACGGTCA CCGGCCAGTT GGGCAATGGC TGCAACTCAC AGACCTACCT GTCACTGCTG
GACCACCCTA CCTATGCGGC CGGCGCAGTG CGAGCCATCT GGCAGGAACT GGGCGGTACC
ATTCAAGGCA AGGATCGCGT TGGCGTGCTG CCCGGCAATG CCAAGCTGTT GGCCAAGGCC
TTTTCTCCGG ACCTGGTGGA AGTCATTCGT GACATCAACA AATTCAGCAA CAACACCATG
GCTCAGCAAC TGTTCCTGAG CCTGGGCGAA GAGTTCCGCA ACGAAGCTGA CGGTGACGAC
GGCAAGGCCG CCCAGCGTGT CATCCGTCAG TGGCTGGCGA AGAAAGGCAT CACCGCGCCG
CATCTGGTCA TGGAGAATGG CTCCGGGCTG TCGCGGGCCG AGCGTGTCAG CGCGCGCGAG
ATGGCGGTGA TCCTGCAAGC GGCCTGGCGC AGCCCCTATG CTGCGGAATT CATGAGCTCG
ATGCCGCTGG CCGGTCTCGA CGGAACCATG CGCAAGCGAC TCAAGCGCAC TCCGCTGCTC
GGCGAGGCGC ACATCAAGAC CGGCACCCTG AATACCGTGC GCGCGATTGC CGGCTTCAGC
CGCGACAGCA ACGGCAACAC CTGGGCCGTC GTGGCGATCC TCAACGACCC GCGTCCGTTC
GGCGCATCCT CGATACTCGA CGAAGTACTG GTCGATCTGT ACCGGCAGCC CAAGCTGACC
AACACCACCG TCTCGATCCA GCAATAA
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| Protein sequence | MIKSLRPLLL ASLLLPLALP SYAAVINTTL PPKVQQALKA SKLGDDALSL VMLPLNGPGT
PTVFNADVSV NPASTMKLIT TYAALEMLGP THQWKTEFFT DGTLSNGVLR GNLYLKGGGD
PKLNMEKLWL LMRDLRANGV QQVTGDLVLD RSHFVQPQLP VFNDDGNDDN KPFLVKPDAL
MVNLKALRFV TRNDDGRILV SVEPPIASIR IDNQVKASAS KQCTGDVRYN PVTQADGSVN
VTVTGQLGNG CNSQTYLSLL DHPTYAAGAV RAIWQELGGT IQGKDRVGVL PGNAKLLAKA
FSPDLVEVIR DINKFSNNTM AQQLFLSLGE EFRNEADGDD GKAAQRVIRQ WLAKKGITAP
HLVMENGSGL SRAERVSARE MAVILQAAWR SPYAAEFMSS MPLAGLDGTM RKRLKRTPLL
GEAHIKTGTL NTVRAIAGFS RDSNGNTWAV VAILNDPRPF GASSILDEVL VDLYRQPKLT
NTTVSIQQ
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