Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2102 |
Symbol | |
ID | 3367616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2452501 |
End bp | 2453712 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637652451 |
Product | nitrate transporter |
Protein accession | YP_235183 |
Protein GI | 66045342 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00251699 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATACAA GCTTCTGGAA GGCAGGCCAC AAACCGACCC TGTTCGCGGC CTTTCTCTAT TTCGACCTGA GTTTCATGGT CTGGTACCTG CTTGGTCCGC TGGCGGTGCA GATTGCCACT GACCTGCAGC TGACCACTCA GCAACGTGGC CTGATGGTCG CCACACCGAT TCTGGCGGGT GCGGTGCTGC GCTTCTTCAT GGGCCTGCTG GCCGACCAGC TGTCGCCCAA GACCGCCGGG ATCATCGGCC AGGTGATCGT CATCGGCGCG CTGCTGGCTG CCTGGCAACT GGGCATTCAC ACCTACGGCC AGGTGCTGGT GCTGGGTGTG TTCCTCGGTA TGGCCGGTGC TTCGTTCGCC GTCGCGCTGC CCCTGGCGTC GCAATGGTAT CCAGCGCAGC ATCAGGGCAA GGCCATGGGC ATCGCCGGTG CGGGCAATTC CGGCACTGTA CTGGCCGCGC TGATCGCGCC GGTGCTGGCC GCCAGTTTCG GTTGGAGCAA CGTCTTCGGC CTGGCGCTGA TTCCGCTGGT CCTGACCCTG ATCGCCTTCA CCCTGATGGC ACGCAACGCC CCGCAACGCA GCAAACCCAA ATCCATGGCG GACTACCTCA AGGCGCTGGG TGATCGTGAC AGCTGGTGGT TCATGTTTTT CTACAGCGTG ACGTTCGGTG GTTTCATTGG CCTGGCCAGC GCCCTGCCCG GCTATTTCAA CGACCAATAC GGTTTGAGCC CGATCACTGC CGGTTACTAC ACCGCTGCCT GCGTCTTCGG CGGCAGCCTG ATGCGTCCGC TGGGTGGCGC GCTGGCCGAC CGTTTCGGCG GGATTCGCAC GCTGACCGTG ATGTATGCGG TTGCCGCCAT CGGCATCGCC GCCGTGGGCT TCAACCTGCC AAGTTCGTGG GCAGCACTGG CGCTGTTCGT GGCCGCCATG CTGGGCCTGG GGGCCGGCAA CGGCGCGGTA TTCCAGCTGG TACCGCAGCG CTTCCGCAAG GAAATCGGGG TCATGACCGG CCTGATCGGC ATGGCGGGTG GCATCGGTGG TTTCCTGCTG GCAGCCGGCC TGGGCACCAT CAAACAGAAC ACCGGCGACT ACCAACTGGG CCTGTGGCTG TTCGCCGGCT TGGCGGTACT GGCCTGGTTC GGCCTGCTGA ACGTCAAGCG TCGCTGGAGA ACCACCTGGG GTTCGGCCGC AGTCACGGCG GCTCGGGTCT GA
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Protein sequence | MDTSFWKAGH KPTLFAAFLY FDLSFMVWYL LGPLAVQIAT DLQLTTQQRG LMVATPILAG AVLRFFMGLL ADQLSPKTAG IIGQVIVIGA LLAAWQLGIH TYGQVLVLGV FLGMAGASFA VALPLASQWY PAQHQGKAMG IAGAGNSGTV LAALIAPVLA ASFGWSNVFG LALIPLVLTL IAFTLMARNA PQRSKPKSMA DYLKALGDRD SWWFMFFYSV TFGGFIGLAS ALPGYFNDQY GLSPITAGYY TAACVFGGSL MRPLGGALAD RFGGIRTLTV MYAVAAIGIA AVGFNLPSSW AALALFVAAM LGLGAGNGAV FQLVPQRFRK EIGVMTGLIG MAGGIGGFLL AAGLGTIKQN TGDYQLGLWL FAGLAVLAWF GLLNVKRRWR TTWGSAAVTA ARV
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