| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2098 |
|---|
| Symbol | |
|---|
| ID | 3367612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 2445837 |
|---|
| End bp | 2446598 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637652447 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_235179 |
|---|
| Protein GI | 66045338 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00176224 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00158802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA AAGTATGGCT GGTAGGCGCG GGCCCCGGCG ACCCGGAATT GCTGACCCTC
AAGGCAGTAC GCGCCTTGCA TGAAGCCGAC GTGGTGCTGA TCGACGATCT GGTCAACCCC
GCAGTGCTGG AGCATTGTCC GGGGGCGCGG GTGATCGCGG TCGGCAAGCG CGGCGGTTGC
CGCTCGACGC CGCAAGCGTT TATCCATCGC CTGATGCTGC GCTACGTCCG TCAGGGCAAA
TGTGTGGTCC GCCTCAAAGG CGGCGATCCG TGCATCTTCG GACGTGGTGG TGAAGAGGCT
CAATGGCTGC AGGAACACGG TGTGGCCGTG GAGCTGGTCA ACGGCATTAC AGCGGGTCTT
GCTGGTGCAA CACAGTGCGG CATTTCGCTG ACCCTGCGCG GTATAAGCCG TGGCGTGACA
CTGGTCACCG CCCACACTCA GGATGACAGC ACGCTCAACT GGCAAGCGCT CGCGCAAGGC
GGAACCACCC TGGTGGTTTA CATGGGCGTG GCGAAACTGG CGGAAATTCG CGAGAGCCTG
CTGGCAGGCG GAATGAGTGG CGAGATGCCG GTGGCGATGA TCGAGAACGC TTCGCTGCCA
TGGCAGCGCG AATGCCGTAG CACCCTGAAT GCCATGCAAC AGGACGCAGC CGCTTTCCAG
CTGAAGAGCC CCGCCATTCT GGTGATCGGC GCGGTTGCGG CTTACAGCAA TGAGCTGCTG
AATCAAACCC TGATGGACCA CGCGCAGCTG AATGCCAGCT GA
|
|---|
| Protein sequence | MSAKVWLVGA GPGDPELLTL KAVRALHEAD VVLIDDLVNP AVLEHCPGAR VIAVGKRGGC
RSTPQAFIHR LMLRYVRQGK CVVRLKGGDP CIFGRGGEEA QWLQEHGVAV ELVNGITAGL
AGATQCGISL TLRGISRGVT LVTAHTQDDS TLNWQALAQG GTTLVVYMGV AKLAEIRESL
LAGGMSGEMP VAMIENASLP WQRECRSTLN AMQQDAAAFQ LKSPAILVIG AVAAYSNELL
NQTLMDHAQL NAS
|
|---|
| |